Pre_GI: BLASTP Hits

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Query: NC_010102:3919999:3940417 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 3940417, End: 3941733, Length: 1317

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:3991551:4012384401238440137001317Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease0768
NC_003198:3855157:3855157385515738564731317Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable permease0768
NC_006511:3759550:3780454378045437817701317Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCprobable permease0768
NC_003197:3971905:3992244399224439935601317Salmonella typhimurium LT2, complete genomeputative L-fucose permease0768
NC_011080:3941909:3962828396282839641441317Salmonella enterica subsp. enterica serovar Newport str. SL254,L-fucose:H+ symporter permease0768
NC_011083:3985618:4006453400645340077691317Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,L-fucose:H+ symporter permease0768
NC_011149:3895921:3916756391675639180721317Salmonella enterica subsp. enterica serovar Agona str. SL483,L-fucose:H+ symporter permease0768
NC_011094:3853036:3874035387403538753511317Salmonella enterica subsp. enterica serovar Schwarzengrund strL-fucose:H+ symporter permease0768
NC_011147:3755725:3776133377613337774491317Salmonella enterica subsp. enterica serovar Paratyphi A strpermease0768
NC_016810:3993863:4013556401355640148721317Salmonella enterica subsp. enterica serovar Typhimurium strpermease0768
NC_016856:3985597:4005936400593640072521317Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative L-fucose permease0768
NC_016857:3993864:4013557401355740148731317Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74permease0768
NC_016860:4055117:4097355409735540986711317Salmonella enterica subsp. enterica serovar Typhimurium strL-fucose:H+ symporter permease0768
NC_016863:3933848:3953543395354339548591317Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative L-fucose permease0768
NC_012125:3905782:3926702392670239280181317Salmonella enterica subsp. enterica serovar Paratyphi C strainpermease0766
CP002797:4603787:4631766463176646330821317Escherichia coli NA114, complete genomePutative fucose/glucose/galactose permease0742
NC_004431:279868:3026793026793039951317Escherichia coli CFT073, complete genomePutative L-fucose permease0740
NC_008253:3122148:3149090314909031504061317Escherichia coli 536, complete genomeputative L-fucose permease0739
NC_011745:333061:3403903403903417061317Escherichia coli ED1a chromosome, complete genomeputative L-fucose permease0735
NC_021064:1789980:1799726179972618010571332Propionibacterium avidum 44067, complete genomeL-fucose transporter2e-122439
NC_020209:1949500:1950553195055319518841332Pseudomonas poae RE*1-1-14, complete genomeL-fucose permease2e-94346
NC_008309:1628939:1633660163366016349521293Haemophilus somnus 129PT, complete genomeL-fucose permease2e-40167
NC_017279:437665:4577824577824590381257Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeL-fucose permease4e-31135
NC_017281:433995:4532574532574545131257Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeL-fucose permease5e-31135
NC_003912:472000:4912884912884925441257Campylobacter jejuni RM1221, complete genomeL-fucose permease5e-31135
NC_013722:3117442:3135935313593531372631329Xanthomonas albilineans, complete genomeputative glucose/galactose transporter protein2e-29130
NC_011146:4196652:4198032419803241993391308Geobacter bemidjiensis Bem, complete genomeglucose/galactose transporter8e-29128
NC_008322:4000330:4010764401076440120021239Shewanella sp. MR-7, complete genomeglucose/galactose transporter3e-28126
NC_014933:3015678:3036956303695630381641209Bacteroides helcogenes P 36-108 chromosome, complete genomeL-fucose transporter3e-26120
NC_014924:3270547:3271601327160132729021302Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeglucose/galactose transporter4e-23109
NC_013730:4440943:4445032444503244462731242Spirosoma linguale DSM 74, complete genomeglucose/galactose transporter6e-1685.9
NC_015177:915366:9167389167389180571320Pedobacter saltans DSM 12145 chromosome, complete genomeglucose/galactose transporter2e-1480.5
NC_002971:211331:2384082384082396341227Coxiella burnetii RSA 493, complete genomeglucose/galactose transporter family protein1e-1275.1
NC_013037:5395951:5413584541358454149061323Dyadobacter fermentans DSM 18053, complete genomeglucose/galactose transporter2e-1273.9