Pre_GI: BLASTP Hits

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Query: NC_010102:3919999:3931758 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 3931758, End: 3932045, Length: 288

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:3933848:394496339449633945250288Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-48190
NC_011080:3941909:395424839542483954535288Salmonella enterica subsp. enterica serovar Newport str. SL254,putative IIB component of PTS system3e-48190
NC_011149:3895921:390817639081763908463288Salmonella enterica subsp. enterica serovar Agona str. SL483,putative IIB component of PTS system3e-48190
NC_006905:3913988:392333139233313923618288Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein3e-48190
NC_003198:3855157:386484538648453865132288Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system IIB component3e-48190
NC_011083:3985618:399787339978733998160288Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative IIB component of PTS system3e-48190
NC_003197:3971905:398366439836643983951288Salmonella typhimurium LT2, complete genomeputative periplasmic protein3e-48190
NC_004631:3841975:385033538503353850622288Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative IIB component of PTS system3e-48190
NC_006511:3759550:377179637717963772083288Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative PTS system IIB component3e-48190
NC_011094:3853036:386537638653763865663288Salmonella enterica subsp. enterica serovar Schwarzengrund strPTS system transporter subunit IIB3e-48190
NC_011147:3755725:376747537674753767762288Salmonella enterica subsp. enterica serovar Paratyphi A strPTS system transporter subunit IIB3e-48190
NC_016810:3993863:400497740049774005264288Salmonella enterica subsp. enterica serovar Typhimurium strputative IIB component of PTS system3e-48190
NC_016856:3985597:399735639973563997643288Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-48190
NC_016857:3993864:400497840049784005265288Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative PTS system IIB component3e-48190
NC_016860:3995445:400656040065604006847288Salmonella enterica subsp. enterica serovar Typhimurium strputative PTS system IIB protein3e-48190
NC_017046:3991551:400380540038054004038234Salmonella enterica subsp. enterica serovar Typhimurium str. 798PTS system transporter subunit IIB2e-37154
NC_012125:3905782:391812139181213918354234Salmonella enterica subsp. enterica serovar Paratyphi C strainperiplasmic protein2e-37154
NC_014363:427393:444980444980445261282Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit6e-27119
NC_009617:234782:252522252522252800279Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphotransferase system, lactose/cellobiose-specific IIB subunit6e-1476.3
NC_017047:3793000:380869238086923808976285Rahnella aquatilis HX2 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB1e-1272
NC_015061:3725921:374404637440463744330285Rahnella sp. Y9602 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugar phosphotransferase1e-1272
NC_016818:3736213:375149537514953751779285Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system galactitol-specific transporter subunit IIB4e-1270.1
NC_012967:2105251:212764221276422127926285Escherichia coli B str. REL606 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB9e-1268.9
NC_013008:2824511:284359828435982843882285Escherichia coli O157:H7 str. TW14359 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB1e-1168.9
NC_004431:2444972:246432424643242464608285Escherichia coli CFT073, complete genomePTS system, galactitol-specific IIB component1e-1168.9
NC_008253:2198583:221485922148592215143285Escherichia coli 536, complete genomePTS system, galactitol-specific IIB component4e-1167
NC_015389:616430:624853624853625134282Coriobacterium glomerans PW2 chromosome, complete genomePTS system IIB component, Gat family4e-1167
NC_014624:1675500:176003717600371760312276Eubacterium limosum KIST612 chromosome, complete genomePTS system protein2e-1064.3
NC_003210:2721559:274005227400522740333282Listeria monocytogenes EGD-e, complete genomehypothetical protein5e-1063.2
NC_003212:2814737:283100028310002831281282Listeria innocua Clip11262, complete genomehypothetical protein5e-1063.2
NC_008555:2628858:264509526450952645376282Listeria welshimeri serovar 6b str. SLCC5334, complete genomePTS system, galactitol-specific, IIB component5e-1063.2
NC_010473:4630361:463008646300864630364279Escherichia coli str. K-12 substr. DH10B, complete genomepredicted enzyme IIB component of PTS1e-0961.6
NC_000913:4528278:452827845282784528556279Escherichia coli K12, complete genomepredicted enzyme IIB component of PTS1e-0961.6
AC_000091:4534935:453493545349354535213279Escherichia coli W3110 DNA, complete genomepredicted enzyme IIB component of PTS1e-0961.6
NC_011742:4873351:487307648730764873354279Escherichia coli S88 chromosome, complete genomeenzyme IIB component of PTS; KpLE2 phage-like element1e-0961.6
NC_012759:4467288:446701344670134467291279Escherichia coli BW2952 chromosome, complete genomeputative enzyme IIB component of PTS1e-0961.6
NC_012947:3883484:390343739034373903715279Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeprotein-N(pi)-phosphohistidine--sugar phosphotransferase1e-0961.6
NC_012967:4510393:451039345103934510671279Escherichia coli B str. REL606 chromosome, complete genomeputative PTS system transporter subunit IIB1e-0961.6
NC_013316:2585666:259963425996342599909276Clostridium difficile R20291, complete genomePTS system, galactitol-specific IIb component4e-0960.1
NC_013315:2505792:251907825190782519353276Clostridium difficile CD196 chromosome, complete genomePTS system galactitol-specific transporter subunit IIB4e-0960.1
NC_017179:2513804:252709025270902527365276Clostridium difficile BI1, complete genomePTS system galactitol-specific transporter subunit IIB4e-0960.1
NC_002570:207555:208899208899209183285Bacillus halodurans C-125, complete genomePTS system, galactitol-specific enzyme II, B component2e-0858.2
NC_014039:15236:250002500025302303Propionibacterium acnes SK137 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIB subunit3e-0857.4
NC_014650:2417509:242851324285132428797285Geobacillus sp. Y4.1MC1 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific subunit IIB4e-0856.6
NC_006085:15246:250112501125313303Propionibacterium acnes KPA171202, complete genomePTS system, galactitol-specific IIB component8e-0855.8
NC_016511:15100:248652486525167303Propionibacterium acnes TypeIA2 P.acn31 chromosome, completePTS system galactitol-specific transporter subunit IIB8e-0855.8
NC_016512:15102:248672486725169303Propionibacterium acnes TypeIA2 P.acn17 chromosome, completePTS system galactitol-specific transporter subunit IIB8e-0855.8
NC_016516:15102:248672486725169303Propionibacterium acnes TypeIA2 P.acn33 chromosome, completePTS system galactitol-specific transporter subunit IIB8e-0855.8
NC_014363:427393:435955435955436245291Olsenella uli DSM 7084 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit5e-0753.1
NC_021182:3771523:378593337859333786214282Clostridium pasteurianum BC1, complete genomephosphotransferase system, galactitol-specific IIB component6e-0752.8
NC_013517:3948500:395185739518573952156300Sebaldella termitidis ATCC 33386, complete genomephosphotransferase system lactose/cellobiose- specific IIB subunit3e-0650.8
NC_013517:1849912:186011218601121860390279Sebaldella termitidis ATCC 33386, complete genomephosphotransferase system lactose/cellobiose- specific IIB subunit5e-0650.1
NC_007712:2978000:297913929791392979414276Sodalis glossinidius str. 'morsitans', complete genomeputative PTS system galactitol-specific IIB component9e-0648.9