Pre_GI: BLASTP Hits

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Query: NC_010102:3919999:3927231 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 3927231, End: 3927554, Length: 324

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:3905782:391237039123703912693324Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA-binding protein4e-57219
NC_011147:3755725:376294837629483763271324Salmonella enterica subsp. enterica serovar Paratyphi A strDNA-binding protein4e-57219
NC_006905:3913988:391758039175803917903324Salmonella enterica subsp. enterica serovar Choleraesuis strputative helix-turn-helix protein4e-57219
NC_006511:3759550:376726937672693767592324Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative DNA-binding protein4e-57219
NC_011149:3895921:390364939036493903972324Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA-binding protein1e-56218
NC_003198:3855157:386933638693363869659324Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative DNA-binding protein3e-56216
NC_011080:3941909:394849739484973948820324Salmonella enterica subsp. enterica serovar Newport str. SL254,DNA-binding protein3e-56216
NC_004631:3841975:385482638548263855149324Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative DNA-binding protein3e-56216
NC_011094:3853036:385962438596243859947324Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-binding protein3e-56216
NC_003197:3971905:397913739791373979460324Salmonella typhimurium LT2, complete genomeputative DNA-binding protein7e-56215
NC_011083:3985618:399334639933463993669324Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA-binding protein7e-56215
NC_016810:3993863:400045040004504000773324Salmonella enterica subsp. enterica serovar Typhimurium strputative DNA-binding protein7e-56215
NC_016856:3985597:399282939928293993152324Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative DNA-binding protein7e-56215
NC_016857:3993864:400045140004514000774324Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative DNA-binding protein7e-56215
NC_016860:3995445:400203340020334002356324Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding protein7e-56215
NC_016863:3933848:394043639404363940759324Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative DNA-binding protein7e-56215
NC_012912:4167429:418443541844354184758324Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family8e-51198
NC_014562:3985500:400284740028474003170324Pantoea vagans C9-1 chromosome, complete genomePutative HTH-type transcriptional regulatory protein1e-48191
NC_011750:4390000:443710244371024437425324Escherichia coli IAI39 chromosome, complete genomeputative transcriptional regulator7e-47185
NC_013941:4470932:451613745161374516460324Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA-binding protein2e-46183
NC_013008:4643825:468778946877894688112324Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-46183
NC_011353:4688000:473174847317484732071324Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-binding protein2e-46183
NC_002695:4584177:462864446286444628967324Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA-binding protein2e-46183
NC_002655:4653160:469762746976274697950324Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-46183
NC_014837:1144500:116031411603141160637324Pantoea sp. At-9b chromosome, complete genomeXRE family transcriptional regulator6e-46182
NC_019940:3518670:353201235320123532329318Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator2e-23107
NC_007512:2024880:202975120297512030074324Pelodictyon luteolum DSM 273, complete genometranscriptional regulator, XRE family6e-22102
NC_015276:3829059:383324238332423833547306Marinomonas mediterranea MMB-1 chromosome, complete genometranscriptional regulator, XRE family2e-1994.4
NC_015559:3645181:366265436626543662959306Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeXRE family transcriptional regulator1e-1892
NC_016616:2644883:265253126525312652830300Dechlorosoma suillum PS chromosome, complete genomeputative transcriptional regulator2e-1890.9
NC_008577:1455000:146035414603541460659306Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator-like protein3e-1890.1
NC_010943:1332243:136553413655341365839306Stenotrophomonas maltophilia K279a, complete genomehypothetical protein6e-1889.4
NC_020829:2152000:216316121631612163463303Pseudomonas denitrificans ATCC 13867, complete genomeDNA-binding protein1e-1788.2
NC_008782:2781229:279929827992982799600303Acidovorax sp. JS42, complete genometranscriptional regulator2e-1788.2
NC_015422:1694363:170732417073241707626303Alicycliphilus denitrificans K601 chromosome, complete genomeXRE family transcriptional regulator2e-1788.2
NC_008740:2989856:299940129994012999724324Marinobacter aquaeolei VT8, complete genomehelix-turn-helix domain protein7e-1785.9
NC_015388:2211828:222315922231592223500342Desulfobacca acetoxidans DSM 11109 chromosome, complete genometranscriptional regulator, XRE family1e-1271.6
NC_007512:944941:970508970508970810303Pelodictyon luteolum DSM 273, complete genometranscriptional regulator, XRE family6e-1269.7
NC_002506:370629:415268415268415582315Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein1e-0858.5
NC_009456:787322:839109839109839423315Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein1e-0858.5
NC_012583:361241:424519424519424833315Vibrio cholerae O395 chromosome chromosome II, complete sequencevirulence gene repressor RsaL1e-0858.5
NC_012667:931390:970665970665970979315Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein1e-0858.5
NC_016945:370471:415087415087415401315Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-0858.5
NC_017269:303500:318521318521318835315Vibrio cholerae LMA3984-4 chromosome II, complete sequencehypothetical protein1e-0858.2
NC_007760:3655433:366449936644993664813315Anaeromyxobacter dehalogenans 2CP-C, complete genometranscriptional regulator, XRE family2e-0857.8
NC_008757:206036:218164218164218451288Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeputative transcriptional regulator8e-0855.8
NC_013889:1623697:163974916397491640033285Thioalkalivibrio sp. K90mix chromosome, complete genometranscriptional regulator, XRE family2e-0651.2
NC_014960:2371989:238808623880862388379294Anaerolinea thermophila UNI-1, complete genomeXre family DNA-binding protein9e-0648.9