Pre_GI: BLASTP Hits

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Query: NC_010102:283364:285193 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 285193, End: 285900, Length: 708

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:283289:282585282585283292708Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-125447
NC_009832:4136878:415343641534364154143708Serratia proteamaculans 568, complete genomeprotein of unknown function UPF00662e-90332
NC_020211:4168189:418402241840224184729708Serratia marcescens WW4, complete genomehypothetical protein, UPF0066 family5e-90330
NC_015566:4205854:422219442221944222901708Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-89328
NC_012779:610509:617676617676618380705Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-81301
NC_016745:2785346:280710228071022807806705Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein9e-66249
NC_010519:71365:958669586696588723Haemophilus somnus 2336 chromosome, complete genomehypothetical protein9e-63239
NC_009053:1668500:167270516727051673460756Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein5e-58224
NC_008345:3287000:330650433065043307292789Shewanella frigidimarina NCIMB 400, complete genomeprotein of unknown function UPF00669e-58223
NC_010939:1633000:163490916349091635664756Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein7e-57220
NC_010278:1625695:162987916298791630634756Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein5e-55214
NC_007645:5397526:542575654257565426475720Hahella chejuensis KCTC 2396, complete genomehypothetical protein1e-54212
NC_008740:2989856:300783330078333008582750Marinobacter aquaeolei VT8, complete genomeprotein of unknown function UPF00661e-53209
NC_009654:3215205:322923932292393229958720Marinomonas sp. MWYL1, complete genomehypothetical protein3e-50198
NC_011138:3182807:321093632109363211655720Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein6e-49194
NC_006138:857692:858491858491859207717Desulfotalea psychrophila LSv54, complete genomehypothetical protein6e-48190
NC_017516:2220000:223578622357862236466681Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein2e-42172
NC_008767:2160000:217637521763752177055681Neisseria meningitidis FAM18, complete genomehypothetical protein4e-42171
NC_002946:1902642:190940719094071910087681Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein3e-42171
NC_011035:1908000:192252319225231923203681Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein3e-42171
NC_017511:1812000:182636618263661827046681Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein3e-42171
NC_017512:2209000:222227522222752222955681Neisseria meningitidis WUE 2594, complete genomehypothetical protein2e-41168
NC_019968:1304450:134159613415961342264669Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein1e-30133
NC_011060:330437:347175347175347642468Pelodictyon phaeoclathratiforme BU-1, complete genomeprotein of unknown function UPF00664e-1994.7
NC_020388:1428042:146182714618271462318492Natronomonas moolapensis 8.8.11 complete genomeUPF0066 family protein2e-1789
NC_008536:2717891:273133027313302731791462Solibacter usitatus Ellin6076, complete genomeprotein of unknown function UPF00662e-1685.9
NC_015518:1518047:153795215379521538395444Acidianus hospitalis W1 chromosome, complete genomehypothetical protein5e-1271.6
NC_014391:3103000:312543131254313125898468Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein9e-1270.5
NC_011296:1039749:105754110575411057930390Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein7e-1167.4
NC_009437:166179:184881184881185315435Caldicellulosiruptor saccharolyticus DSM 8903, complete genomehypothetical protein9e-1167
NC_009637:1421885:142755214275521428100549Methanococcus maripaludis C7 chromosome, complete genomehypothetical protein1e-1066.6
NC_015499:119200:119200119200119907708Thermodesulfobium narugense DSM 14796 chromosome, complete genomeUncharacterized protein family UPF00661e-1066.6
NC_014624:1369642:139461113946111395087477Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-1066.2
NC_018870:81396:964049640496856453Thermacetogenium phaeum DSM 12270 chromosome, complete genomemethyltransferase YaeB2e-1065.9
NC_014915:3039639:305019830501983050659462Geobacillus sp. Y412MC52 chromosome, complete genomeUncharacterized protein family UPF00664e-1065.1
NC_009328:2905000:291277529127752913248474Geobacillus thermodenitrificans NG80-2 chromosome, complete genometranscriptional regulator6e-1064.3
NC_013131:7889127:789497278949727895427456Catenulispora acidiphila DSM 44928, complete genomeprotein of unknown function UPF00661e-0963.5
NC_008701:1719464:172465017246501725078429Pyrobaculum islandicum DSM 4184, complete genomeprotein of unknown function UPF00661e-0963.5
NC_014507:863210:865780865780866358579Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein4e-0961.6
NC_021066:1712905:174270617427061743176471Raoultella ornithinolytica B6, complete genomehypothetical protein1e-0860.1
CP002207:2169277:217014121701412170599459Bacillus atrophaeus 1942, complete genomehypothetical protein1e-0860.1
NC_014639:2169277:217014121701412170599459Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein1e-0860.1
NC_008701:391216:408124408124408600477Pyrobaculum islandicum DSM 4184, complete genomeprotein of unknown function UPF00663e-0858.9
NC_008554:2308500:232819923281992328594396Syntrophobacter fumaroxidans MPOB, complete genomeprotein of unknown function UPF00665e-0858.2
NC_015160:1467445:147244714724471473349903Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein2e-0652.8
NC_003888:7706226:771197077119707712521552Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0652.8