Pre_GI: BLASTP Hits

Some Help

Query: NC_010102:2762304:2778305 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2778305, End: 2779558, Length: 1254

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2667561:2693002269300226943811380Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0832
NC_011274:311843:3280693280693295891521Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0832
NC_014618:690056:7014637014637029801518Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-76287
NC_011601:1114104:1121713112171311232421530Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-43175
NC_010498:2278306:2299911229991123014761566Escherichia coli SMS-3-5, complete genomehypothetical protein3e-40166
NC_012691:2476223:2498852249885225002971446Tolumonas auensis DSM 9187, complete genomeCP4-57 prophage; hypothetical protein1e-36154
NC_017328:1075535:1084079108407910854611383Shigella flexneri 2002017 chromosome, complete genomeCP4-57 prophage hypothetical protein2e-31137
NC_015761:299386:3070563070563085491494Salmonella bongori NCTC 12419, complete genomeprophage membrane protein1e-26120
NC_005085:1269787:1311545131154513129541410Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein3e-25116
NC_012691:1250385:1271066127106612725021437Tolumonas auensis DSM 9187, complete genomeCP4-57 prophage; hypothetical protein3e-24113
NC_011000:1216430:1226078122607812275351458Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein8e-24111
AC_000091:2747520:2757641275764127590501410Escherichia coli W3110 DNA, complete genomehypothetical protein7e-23108
NC_010473:2839902:2848772284877228501811410Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted protein7e-23108
NC_000913:2746886:2757007275700727584161410Escherichia coli K12, complete genomeCP4-57 prophage; predicted protein7e-23108
NC_012759:2633949:2642819264281926442281410Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage protein7e-23108
NC_009138:1843998:1876590187659018780411452Herminiimonas arsenicoxydans, complete genomeCP4-57 prophage; conserved hypothetical protein1e-22107
NC_013353:3853082:3884833388483338862661434Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein3e-21103
AP010958:3853082:3884833388483338862661434Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein3e-21103
NC_004431:1119700:1132944113294411344041461Escherichia coli CFT073, complete genomeHypothetical protein yfjI5e-2099.4
NC_002695:1364833:1375887137588713772721386Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1998.2
NC_011353:1307106:1318160131816013195451386Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-1998.2
NC_013008:1307392:1318446131844613198311386Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-1998.2
NC_002655:1053082:1064034106403410654371404Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-2098.2
NC_002655:1448605:1459641145964114610441404Escherichia coli O157:H7 EDL933, complete genomehypothetical protein9e-2098.2
NC_013364:1257801:1269648126964812710811434Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-1997.4
NC_013361:1284579:1296428129642812978611434Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-1997.4
NC_012912:1053618:1070772107077210721841413Dickeya zeae Ech1591, complete genomeCP4-57 prophage; hypothetical protein2e-1997.4
NC_012791:721813:7399787399787414951518Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein2e-1997.4
NC_009138:467268:4767694767694782231455Herminiimonas arsenicoxydans, complete genomeCP4-57 prophage; conserved hypothetical protein5e-1995.9
NC_009659:1050532:1107984110798411094351452Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein1e-1894.7
NC_009138:668000:6838256838256851471323Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein, putative prophage protein similar to protein of phage CP4-57 of E. coli (YfjI)1e-1894.7
NC_007946:1073135:1086378108637810878291452Escherichia coli UTI89, complete genomehypothetical protein YfjI3e-1893.2
NC_010634:1342393:1348313134831313497491437Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-1892
NC_008577:2115440:2122846212284621243151470Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein6e-1892
NC_020064:3609844:3627627362762736291891563Serratia marcescens FGI94, complete genomehypothetical protein1e-1790.9
NC_009832:1946401:1954913195491319563461434Serratia proteamaculans 568, complete genomehypothetical protein5e-1789.4
NC_008322:2077628:2086695208669520881611467Shewanella sp. MR-7, complete genomehypothetical protein2e-1687.4
NC_020181:5130513:5138731513873151401881458Enterobacter aerogenes EA1509E, complete genomehypothetical protein2e-1687
NC_011751:3453683:3510875351087535123831509Escherichia coli UMN026 chromosome, complete genomehypothetical protein8e-1685.1
NC_004431:3409389:3487786348778634892941509Escherichia coli CFT073, complete genomeHypothetical protein yfjI8e-1685.1
NC_011000:2831183:2854505285450528559741470Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-1584
NC_008321:1993541:2003786200378620052851500Shewanella sp. MR-4, complete genomehypothetical protein3e-1480.1
NC_011083:4547825:4575661457566145772651605Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1377.4
NC_011745:291422:301178301178301948771Escherichia coli ED1a chromosome, complete genome8e-1375.1
NC_015381:1558263:1566319156631915679381620Burkholderia gladioli BSR3 chromosome 1, complete sequenceCP4-57 prophage; hypothetical protein4e-1169.7
NC_008253:3941938:3970733397073339724151683Escherichia coli 536, complete genomehypothetical protein1e-1067.8
NC_007802:224470:2272782272782288011524Jannaschia sp. CCS1, complete genomehypothetical protein1e-1067.8
NC_015434:5434500:5439821543982154417761956Verrucosispora maris AB-18-032 chromosome, complete genomeDnaB domain-containing protein helicase domain-containing protein8e-1065.5
NC_018678:2382708:2390336239033623918411506Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein7e-1065.5
NC_015740:2407500:2419559241955924210581500Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein1e-0964.7
NC_014153:3084356:3103690310369031051801491Thiomonas intermedia K12 chromosome, complete genomehypothetical protein2e-0860.5
NC_013729:5982000:5990566599056659922001635Kribbella flavida DSM 17836, complete genomehypothetical protein2e-0860.5
NC_012108:1973861:1993336199333619958582523Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein1e-0654.7
NC_021177:4221309:4246016424601642475661551Streptomyces fulvissimus DSM 40593, complete genomeHyphothetical protein2e-0653.5
NC_014815:3272791:3291958329195832935561599Micromonospora sp. L5 chromosome, complete genomehypothetical protein3e-0653.5