Pre_GI: BLASTP Hits

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Query: NC_010102:25893:47063 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 47063, End: 47209, Length: 147

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:12161:252532525325471219Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein6e-0752.8
NC_011748:11394:231422314223360219Escherichia coli 55989, complete genomehypothetical protein6e-0752.8
CU928145:11394:231422314223360219Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein6e-0752.8
CU928160:11381:231302313023348219Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein6e-0752.8
CP002516:4081484:408727540872754087493219Escherichia coli KO11, complete genomehypothetical protein6e-0752.8
NC_009800:12162:244772447724695219Escherichia coli HS, complete genomehypothetical protein6e-0752.8
NC_009801:11921:243962439624614219Escherichia coli E24377A, complete genomehypothetical protein6e-0752.8
NC_007384:16500:283472834728565219Shigella sonnei Ss046, complete genomehypothetical protein6e-0752.8
NC_011415:11381:231282312823346219Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-0752.8
NC_011741:11381:231302313023348219Escherichia coli IAI1 chromosome, complete genomehypothetical protein6e-0752.8
NC_013353:12660:244082440824626219Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-0752.8
NC_013361:11382:231392313923357219Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-0752.8
NC_016822:15401:275672756727785219Shigella sonnei 53G, complete genomehypothetical protein6e-0752.8
NC_016902:4081484:408727540872754087493219Escherichia coli KO11FL chromosome, complete genomehypothetical protein6e-0752.8
NC_011751:12000:255392553925757219Escherichia coli UMN026 chromosome, complete genomehypothetical protein6e-0752.8
NC_012947:3753375:375825137582513758469219Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein6e-0752.8
AP010958:12660:244082440824626219Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein6e-0752.8