Pre_GI: BLASTP Hits

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Query: NC_010102:2495441:2498853 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2498853, End: 2499287, Length: 435

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011274:603901:616798616798617034237Salmonella enterica subsp. enterica serovar Gallinarum str. 287/913e-38156
NC_003197:606048:618968618968619207240Salmonella typhimurium LT2, complete genome3e-38156
NC_016810:604813:618456618456618692237Salmonella enterica subsp. enterica serovar Typhimurium str9e-38155
NC_011294:585500:598426598426598662237Salmonella enterica subsp. enterica serovar Enteritidis str9e-38155
NC_011274:603901:616798616798617034237Salmonella enterica subsp. enterica serovar Gallinarum str. 287/919e-38155
NC_015663:2090442:2118124211812421212733150Enterobacter aerogenes KCTC 2190 chromosome, complete genomecation efflux system protein CusA6e-32135
NC_009778:4188000:4206746420674642098923147Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-31132
NC_011080:610428:623427623427623684258Salmonella enterica subsp. enterica serovar Newport str. SL254,cation efflux system protein CusA6e-28122
NC_011205:645591:664013664013664201189Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cation efflux system protein CusA1e-27122
NC_011083:654479:667449667449667637189Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cation efflux system protein CusA1e-27122
NC_016831:2402893:240573224057322405911180Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-26117
NC_016857:604792:618516618516618695180Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transport protein3e-26117
NC_016863:606742:619721619721619900180Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transport protein3e-26117
NC_017046:604789:618513618513618692180Salmonella enterica subsp. enterica serovar Typhimurium str. 7983e-26117
NC_011094:688626:701942701942702157216Salmonella enterica subsp. enterica serovar Schwarzengrund strcation efflux system protein CusA4e-24109
NC_011149:588895:601865601865602080216Salmonella enterica subsp. enterica serovar Agona str. SL483,cation efflux system protein CusA5e-24109
NC_016860:644095:657090657090657254165Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-23107
NC_016856:606742:619737619737619901165Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-23107
NC_002947:6123608:6140255614025561434133159Pseudomonas putida KT2440, complete genomeheavy metal RND efflux transporter, CzcA family1e-1995.1
NC_010170:4800000:4834829483482948379963168Bordetella petrii, complete genomeAcrB/AcrD/AcrF family protein3e-1994
NC_009659:1923925:1945984194598419491363153Janthinobacterium sp. Marseille chromosome, complete genomesilver efflux pump3e-1994
NC_015733:5909821:5950852595085259540103159Pseudomonas putida S16 chromosome, complete genomeCzcA family heavy metal efflux protein4e-1993.6
NC_009138:1544835:1544835154483515478072973Herminiimonas arsenicoxydans, complete genomeouter membrane copper (silver) and drug transport protein (RND family)5e-1993.2
NC_009659:1050532:1054388105438810575403153Janthinobacterium sp. Marseille chromosome, complete genomeCzcA family heavy metal efflux protein5e-1992.8
NC_009138:519965:5362255362255392873063Herminiimonas arsenicoxydans, complete genomeouter membrane copper (silver) and drug transport protein (RND family) 46e-1992.8
NC_008782:1308007:1308007130800713111263120Acidovorax sp. JS42, complete genomeheavy metal efflux pump, CzcA family7e-1992.4
NC_009512:27783:2462824628277863159Pseudomonas putida F1, complete genomeheavy metal efflux pump, CzcA family2e-1891.3
NC_018080:3088866:3116717311671731198663150Pseudomonas aeruginosa DK2 chromosome, complete genomeCzcA family heavy metal efflux protein3e-1890.5
NC_015726:2177783:2177783217778321809533171Cupriavidus necator N-1 chromosome 1, complete sequencecobalt-zinc-cadmium resistance efflux pump CzcB5e-1889.7
NC_009439:2427120:2445697244569724488463150Pseudomonas mendocina ymp, complete genomeCzcA family heavy metal efflux protein9e-1889
NC_008800:3955284:3956810395681039599413132Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative cation efflux system protein1e-1788.6
NC_015224:3820338:383778238377823838216435Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Heavy metal efflux pump, CzcA family3e-1787
NC_012968:1594954:1628234162823416313593126Methylotenera mobilis JLW8, complete genomeheavy metal efflux pump, CzcA family2e-1684.3
NC_008782:1510000:1537816153781615409473132Acidovorax sp. JS42, complete genomeheavy metal efflux pump, CzcA family2e-1581.3
NC_010087:376918:3927223927223959283207Burkholderia multivorans ATCC 17616 chromosome 3, completeheavy metal efflux pump, CzcA family3e-1580.5
NC_013446:2820000:2853720285372028568903171Comamonas testosteroni CNB-2, complete genomeheavy metal efflux pump, CzcA family4e-1580.1
NC_015422:2858228:2868832286883228720113180Alicycliphilus denitrificans K601 chromosome, complete genomeCzcA family heavy metal efflux pump5e-1579.7
NC_008782:2857899:2866988286698828701673180Acidovorax sp. JS42, complete genomeheavy metal efflux pump, CzcA family6e-1579.3
NC_016616:2768053:2785081278508127882153135Dechlorosoma suillum PS chromosome, complete genomeheavy metal efflux pump7e-1579.3
NC_011992:2279752:2320634232063423237653132Acidovorax ebreus TPSY, complete genomeheavy metal efflux pump, CzcA family7e-1579.3
NC_015422:3513689:3524618352461835277493132Alicycliphilus denitrificans K601 chromosome, complete genomeCzcA family heavy metal efflux pump7e-1579.3
NC_016616:1091606:1107711110771111108453135Dechlorosoma suillum PS chromosome, complete genomeheavy metal efflux pump1e-1478.6
NC_008347:174000:1874661874661906363171Maricaulis maris MCS10, complete genomeputative cation efflux system transmembrane protein2e-1477.8
NC_009720:5079048:5075884507588450790513168Xanthobacter autotrophicus Py2, complete genomeCzcA family heavy metal efflux protein5e-1476.3
NC_014394:738365:7562907562907594003111Gallionella capsiferriformans ES-2 chromosome, complete genomeheavy metal efflux pump, CzcA family8e-1475.5
NC_009434:3611738:3637032363703236401543123Pseudomonas stutzeri A1501, complete genomeheavy metal efflux pump CzcA9e-1475.5
NC_015740:2692023:2692023269202326951333111Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeheavy metal efflux pump CzcA1e-1375.1
NC_014836:33278:3596335963390913129Desulfurispirillum indicum S5 chromosome, complete genomeheavy metal efflux pump, CzcA family1e-1375.1
NC_009832:3703202:3720707372070737238263120Serratia proteamaculans 568, complete genomeheavy metal efflux pump, CzcA family1e-1375.1
NC_012988:1162838:1162838116283811660113174Methylobacterium extorquens DM4, complete genomeouter membrane copper/drug transport protein4e-1373.6
NC_011757:1121262:1122512112251211256853174Methylobacterium chloromethanicum CM4, complete genomeheavy metal efflux pump, CzcA family4e-1373.6
NC_017358:1342000:1363081136308113662033123Helicobacter pylori Cuz20 chromosome, complete genomecation efflux system protein (czcA)1e-1272
NC_017361:1303553:1325980132598013290783099Helicobacter pylori SouthAfrica7 chromosome, complete genomecation efflux system protein1e-1272
NC_011498:1345623:1367874136787413709813108Helicobacter pylori P12, complete genomecobalt-zinc-cadmium resistance protein1e-1272
NC_014560:1309470:1331773133177313348803108Helicobacter pylori SJM180 chromosome, complete genomeputative heavy metal efflux pump CzcA9e-1372
NC_020126:6264651:6267539626753962708413303Myxococcus stipitatus DSM 14675, complete genomecation efflux system protein CusA9e-1372
NC_017371:1358000:1379438137943813825453108Helicobacter pylori Gambia94/24 chromosome, complete genomeputative heavy metal efflux pump CzcA9e-1372
NC_017376:1324000:1345253134525313483663114Helicobacter pylori SNT49 chromosome, complete genomecopper efflux system membrane protein CusA1e-1271.6
NC_017367:1333811:1355963135596313590763114Helicobacter pylori F57, complete genomecation efflux system protein1e-1271.6
NC_017355:1299874:1322095132209513252083114Helicobacter pylori v225d chromosome, complete genomeCzcA family heavy metal efflux pump1e-1271.6
NC_017372:1373766:1395619139561913987263108Helicobacter pylori India7 chromosome, complete genomecation efflux system protein (czcA)1e-1271.6
NC_017368:1300000:1321295132129513244083114Helicobacter pylori F16, complete genomecation efflux system protein2e-1271.2
NC_016602:173314:1912011912011943203120Vibrio furnissii NCTC 11218 chromosome 1, complete sequencecation efflux system transmembrane protein9e-1268.9
NC_003198:598000:610695610695610835141Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1167.8
NC_004631:2366335:237026623702662370406141Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1167.8
NC_007520:1940120:1940120194012019432843165Thiomicrospira crunogena XCL-2, complete genomeHeavy metal efflux pump CzcA1e-1065.1
NC_008607:11663:2463624636277733138Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceheavy metal efflux pump, CzcA family2e-1064.3
NC_011206:2040000:2061034206103420641443111Acidithiobacillus ferrooxidans ATCC 53993, complete genomeheavy metal efflux pump, CzcA family7e-1062.8
NC_011761:2131911:2172992217299221761053114Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeCzcA family heavy metal efflux pump7e-1062.8
NC_007484:1694738:1702681170268117059053225Nitrosococcus oceani ATCC 19707, complete genomeHeavy metal efflux pump4e-0960.1
NC_012982:711122:7345547345547377633210Hirschia baltica ATCC 49814, complete genomeheavy metal efflux pump, CzcA family9e-0958.9
NC_014315:1744485:1753627175362717568483222Nitrosococcus watsoni C-113 chromosome, complete genomeCzcA family heavy metal efflux pump1e-0858.5
NC_016832:2363136:236706723670672367192126Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cation efflux system protein cusA2e-0858.2
NC_010831:931961:9319619319619352303270Chlorobium phaeobacteroides BS1, complete genomeheavy metal efflux pump, CzcA family2e-0857.8
NC_018697:1343756:1354347135434713575533207Cycloclasticus sp. P1 chromosome, complete genomeHeavy metal efflux pump3e-0857.4
NC_006368:2684358:2704471270447127076143144Legionella pneumophila str. Paris, complete genomeChemiosmotic efflux system B protein A8e-0855.8
NC_002942:1109618:1114601111460111177443144Legionella pneumophila subsp. pneumophila str. Philadelphia 1,chemiosmotic efflux system B protein A2e-0754.7
NC_007484:1671835:1694738169473816979413204Nitrosococcus oceani ATCC 19707, complete genomeHeavy metal efflux pump2e-0754.7
NC_007484:1694738:1694738169473816979413204Nitrosococcus oceani ATCC 19707, complete genomeHeavy metal efflux pump2e-0754.7
NC_014315:1744485:1765441176544117686443204Nitrosococcus watsoni C-113 chromosome, complete genomeCzcA family heavy metal efflux pump2e-0754.3
NC_012483:1408500:1417384141738414205513168Acidobacterium capsulatum ATCC 51196, complete genomeheavy metal efflux RND transporter CusA1e-0652
NC_013960:1693643:1699559169955917028733315Nitrosococcus halophilus Nc4 chromosome, complete genomeheavy metal efflux pump, CzcA family2e-0651.2
NC_010125:3467379:3464218346421834673823165Gluconacetobacter diazotrophicus PAl 5, complete genomeputative multidrug resistance protein mdtB9e-0648.9