Pre_GI: BLASTP Hits

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Query: NC_010102:2322866:2341098 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2341098, End: 2341349, Length: 252

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:776734:783150783150783485336Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein7e-33139
NC_016857:775649:782065782065782400336Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein7e-33139
NC_016856:776735:783151783151783486336Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein7e-33139
NC_016810:775649:782065782065782400336Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-33139
NC_003197:776238:782654782654782989336Salmonella typhimurium LT2, complete genomeputative inner membrane protein7e-33139
NC_003198:751779:757913757913758248336Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-33138
NC_004631:2205821:222284722228472223182336Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-33138
NC_016860:816000:821598821598821819222Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-27119
NC_011147:2085241:210274721027472103073327Salmonella enterica subsp. enterica serovar Paratyphi A str1e-21102
NC_006511:2090058:210756421075642107890327Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-21102
NC_016832:2201860:221961222196122219758147Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-1165.9
NC_011080:780850:787454787454787600147Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein7e-1165.9
NC_011083:824659:831253831253831399147Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-1064.7