Pre_GI: BLASTP Hits

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Query: NC_010102:2322866:2330196 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2330196, End: 2330348, Length: 153

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2201860:220919022091902209342153Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-22104
NC_003198:751779:768519768519768671153Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-22104
NC_004631:2205821:221241822124182212570153Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-22104
NC_011083:824659:842148842148842285138Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-2097.8
NC_006511:2090058:209667020966702096807138Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-2097.8
NC_011147:2085241:209185320918532091990138Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-2097.8
NC_003197:776238:793739793739793876138Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein6e-2096.3
NC_011094:842038:859488859488859625138Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-2096.3
NC_016810:775649:793150793150793287138Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-2096.3
NC_016856:776735:794236794236794373138Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein6e-2096.3
NC_016857:775649:793150793150793287138Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein6e-2096.3
NC_016860:816000:832569832569832706138Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-2096.3
NC_016863:776734:794235794235794372138Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein6e-2096.3
NC_017046:775636:793136793136793273138Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein6e-2096.3
NC_011080:780850:798350798350798487138Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein3e-1993.6