Pre_GI: BLASTP Hits

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Query: NC_010102:2322866:2328270 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2328270, End: 2329316, Length: 1047

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2201860:2207264220726422083101047Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-142506
NC_003198:751779:7695517695517705971047Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-142506
NC_004631:2205821:2210492221049222115381047Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-142506
NC_011080:780850:7993827993828004281047Salmonella enterica subsp. enterica serovar Newport str. SL254,protein AbrB1e-141503
NC_003197:776238:7947717947717958171047Salmonella typhimurium LT2, complete genomeputative transport protein1e-141503
NC_016856:776735:7952687952687963141047Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transport protein1e-141503
NC_016857:775649:7941827941827952281047Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transport protein1e-141503
NC_016860:816000:8336018336018346471047Salmonella enterica subsp. enterica serovar Typhimurium strprotein AbrB1e-141503
NC_016863:776734:7952677952677963131047Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transport protein1e-141503
NC_017046:775636:7941687941687952141047Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-141503
NC_011094:842038:8605208605208615661047Salmonella enterica subsp. enterica serovar Schwarzengrund strprotein AbrB7e-142503
NC_011083:824659:8431808431808442261047Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein AbrB6e-141500
NC_011147:2085241:2089912208991220909581047Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-141499
NC_006511:2090058:2094729209472920957751047Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-141499
NC_016810:775649:794182794182795144963Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-140498
NC_012967:707083:7275087275087285541047Escherichia coli B str. REL606 chromosome, complete genomeputative regulator7e-119427
CP002185:794732:8173858173858184311047Escherichia coli W, complete genomepredicted regulator5e-118424
NC_021066:1778000:1794175179417517952301056Raoultella ornithinolytica B6, complete genomeaidB regulatorAbrB6e-91334
NC_012731:2261787:2261787226178722628391053Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transport protein1e-80300
NC_015663:4447984:4467534446753444685711038Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transport protein7e-80297
NC_011666:1923776:1923776192377619248761101Methylocella silvestris BL2, complete genomemembrane protein AbrB duplication4e-48192
NC_010501:2609567:2642531264253126435951065Pseudomonas putida W619, complete genomemembrane protein AbrB duplication4e-44179
NC_015379:2505233:2539690253969025407721083Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-42173
NC_017059:2739015:2761100276110027623561257Rhodospirillum photometricum DSM 122, complete genomePutative ammonia monooxygenase5e-35148
NC_007963:3113739:3123987312398731251201134Chromohalobacter salexigens DSM 3043, complete genomeputative ammonia monooxygenase2e-34146
NC_016147:3349272:3349272334927233503661095Pseudoxanthomonas spadix BD-a59 chromosome, complete genomemembrane protein3e-29129
NC_015410:3093465:3124656312465631257621107Pseudomonas mendocina NK-01 chromosome, complete genomemembrane protein AbrB duplication4e-26119
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome2e-0860.8