Pre_GI: BLASTP Hits

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Query: NC_010102:2020762:2029825 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2029825, End: 2030166, Length: 342

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1127325:113445211344521134793342Salmonella enterica subsp. enterica serovar Typhimurium str. 798cell invasion protein8e-61231
NC_006511:1808815:182011118201111820452342Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcell invasion protein8e-61231
NC_003197:1170746:117787311778731178214342Salmonella typhimurium LT2, complete genomepathogenicity island-encoded protein C8e-61231
NC_011080:1166951:118020911802091180550342Salmonella enterica subsp. enterica serovar Newport str. SL254,chaperone protein SigE8e-61231
NC_011083:1173802:118259811825981182939342Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,chaperone protein SigE8e-61231
NC_011094:1127983:113654411365441136885342Salmonella enterica subsp. enterica serovar Schwarzengrund strchaperone protein SigE8e-61231
NC_011147:1802535:181529418152941815635342Salmonella enterica subsp. enterica serovar Paratyphi A strcell invasion protein8e-61231
NC_011274:1057887:106501010650101065351342Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cell invasion protein8e-61231
NC_011294:1048223:105572110557211056062342Salmonella enterica subsp. enterica serovar Enteritidis strcell invasion protein8e-61231
NC_012125:2687980:269705426970542697395342Salmonella enterica subsp. enterica serovar Paratyphi C straincell invasion protein8e-61231
NC_016863:1128381:113550811355081135849342Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1pathogenicity island-encoded protein C8e-61231
NC_016860:1168431:117555811755581175899342Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein8e-61231
NC_016857:1126693:113419511341951134536342Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74pathogenicity island-encoded protein C8e-61231
NC_016856:1128715:113621711362171136558342Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Spathogenicity island-encoded protein C8e-61231
NC_016831:1950650:195972419597241960065342Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcell invasion protein8e-61231
NC_016810:1126693:113419511341951134536342Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein8e-61231
NC_016832:1880174:188899318889931889334342Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-59228
NC_004631:1881214:189214318921431892484342Salmonella enterica subsp. enterica serovar Typhi Ty2, completecell invasion protein1e-59228
NC_003198:1078113:108832910883291088670342Salmonella enterica subsp. enterica serovar Typhi str. CT18,cell invasion protein1e-59228
NC_011205:1147556:115637011563701156711342Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853chaperone protein SigE2e-59227
NC_011149:1035990:104786310478631048204342Salmonella enterica subsp. enterica serovar Agona str. SL483,chaperone protein SigE4e-58223
NC_010067:1829041:183790318379031838244342Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-53206