Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1831523 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1831523, End: 1831693, Length: 171

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2756000:276966427696642769822159Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein6e-1062.8
NC_016856:2812905:282413228241322824290159Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein6e-1062.8
NC_011080:2761403:277263027726302772788159Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein6e-1062.8
NC_015663:4522109:454088645408864541044159Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-0960.8
NC_016902:2580774:259930325993032599473171Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-0858.2
CP002516:2580774:259930325993032599473171Escherichia coli KO11, complete genomehypothetical protein1e-0858.2
CP002185:1493280:150637715063771506547171Escherichia coli W, complete genomeRac prophage; conserved protein1e-0858.2
NC_009792:1770106:179023217902321790390159Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0858.2
NC_013850:2182337:219194321919432192098156Klebsiella variicola At-22 chromosome, complete genomehypothetical protein3e-0857
NC_009648:1541699:155001015500101550366357Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein8e-0855.8
NC_003198:1908238:192687719268771927047171Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative bacteriophage protein2e-0754.3
NC_011415:1472500:148126614812661481442177Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-0651.2
NC_012967:1403733:141500814150081415178171Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-0651.2
NC_012947:2366000:238070723807072380877171Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completebacteriophage protein2e-0651.2
NC_012759:1296000:130792113079211308091171Escherichia coli BW2952 chromosome, complete genomeRac prophage protein2e-0651.2
NC_010473:1493983:150525815052581505428171Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; conserved protein2e-0651.2
AC_000091:1407693:141955214195521419722171Escherichia coli W3110 DNA, complete genomehypothetical protein2e-0651.2
NC_000913:1404000:141586214158621416032171Escherichia coli K12, complete genomeRac prophage; conserved protein2e-0651.2