Pre_GI: BLASTP Hits

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Query: NC_010102:1779707:1804279 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1804279, End: 1804812, Length: 534

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2026672:204535520453552045888534Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage baseplate protein6e-101365
NC_016863:2029340:204802320480232048556534Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein6e-101365
NC_016857:2027311:204599420459942046527534Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative base plate assembly protein6e-101365
NC_016856:2085283:209983120998312100364534Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative base plate assembly protein6e-101365
NC_016810:2027311:204599420459942046527534Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage baseplate protein6e-101365
NC_011205:2137696:215301821530182153551534Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage Mu Gp45 protein6e-101365
NC_011094:2115750:213167621316762132209534Salmonella enterica subsp. enterica serovar Schwarzengrund strbacteriophage Mu Gp45 protein4e-100363
NC_011294:2009388:202471120247112025244534Salmonella enterica subsp. enterica serovar Enteritidis strphage baseplate protein5e-100362
NC_009436:2776410:279203427920342792576543Enterobacter sp. 638, complete genomephage baseplate assembly protein V7e-64242
NC_011740:621408:622487622487623035549Escherichia fergusonii ATCC 35469, complete genomeputative baseplate assembly phage protein1e-59228
NC_011742:2823000:284261128426112843159549Escherichia coli S88 chromosome, complete genomebaseplate assembly phage protein5e-59226
NC_008563:2909945:292530129253012925849549Escherichia coli APEC O1, complete genomebacteriophage V tail protein5e-59226
NC_007946:2894793:291027429102742910822549Escherichia coli UTI89, complete genomebacteriophage V tail protein5e-59226
NC_011750:2928990:294209829420982942646549Escherichia coli IAI39 chromosome, complete genomeputative baseplate assembly phage protein1e-57222
NC_008258:269806:270885270885271433549Shigella flexneri 5 str. 8401, complete genometail protein1e-57221
NC_007712:1182518:119662311966231197189567Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-34145
NC_007712:4023516:403477740347774035328552Sodalis glossinidius str. 'morsitans', complete genomephage assembly protein5e-28123
NC_015733:1398083:139808313980831398583501Pseudomonas putida S16 chromosome, complete genomePhage assembly protein4e-24110
NC_002947:4362271:438590643859064386406501Pseudomonas putida KT2440, complete genomephage assembly protein, putative4e-23107
NC_002937:255790:256925256925257563639Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completephage baseplate assembly protein V, putative1e-1685.9
NC_002937:2933000:295332229533222953960639Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completephage baseplate assembly protein V, putative1e-1685.9
NC_009800:2049346:207211820721182072699582Escherichia coli HS, complete genomebacteriophage Mu Gp45 protein4e-1684.3
NC_014228:3282500:331026233102623310807546Xenorhabdus nematophila ATCC 19061, complete genomeputative baseplate assembly protein1e-1375.9
NC_000907:1568867:158827715882771588825549Haemophilus influenzae Rd KW20, complete genomehypothetical protein2e-1168.2
NC_002927:3827211:383902838390283839669642Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-1065.1
NC_014306:3524980:353977935397793540378600Erwinia billingiae Eb661, complete genomePhage-related baseplate assembly protein8e-0960.1
NC_016628:373815:395011395011395586576Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage baseplate assembly protein2e-0755.5