Pre_GI: BLASTP Hits

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Query: NC_010102:1779707:1803861 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1803861, End: 1804274, Length: 414

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:2115750:213125821312582131671414Salmonella enterica subsp. enterica serovar Schwarzengrund strphage protein GP461e-74278
NC_011205:2137696:215260021526002153013414Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage protein GP467e-74275
NC_011294:2009388:202429320242932024706414Salmonella enterica subsp. enterica serovar Enteritidis strphage protein7e-74275
NC_016810:2027311:204557620455762045989414Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein7e-74275
NC_016856:2085283:209941320994132099826414Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein7e-74275
NC_016857:2027311:204557620455762045989414Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative tail protein7e-74275
NC_016863:2029340:204760520476052048018414Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein7e-74275
NC_017046:2026672:204493720449372045350414Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein7e-74275
NC_008258:269806:271433271433271858426Shigella flexneri 5 str. 8401, complete genometail protein5e-39159
NC_011750:2928990:294167329416732942101429Escherichia coli IAI39 chromosome, complete genomeputative tail protein6e-39159
NC_011740:621408:623032623032623460429Escherichia fergusonii ATCC 35469, complete genomeputative tail protein6e-39159
NC_007946:2894793:290984929098492910274426Escherichia coli UTI89, complete genomebacteriophage V tail protein4e-38156
NC_008563:2909945:292487629248762925304429Escherichia coli APEC O1, complete genomebacteriophage V tail protein4e-38156
NC_011742:2823000:284218628421862842614429Escherichia coli S88 chromosome, complete genometail protein4e-38156
NC_007712:1182518:119620711962071196617411Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-34142
NC_009436:2776410:279160927916092792034426Enterobacter sp. 638, complete genomephage GP46 family protein3e-33140
NC_002947:4362271:438552343855234385909387Pseudomonas putida KT2440, complete genomephage FluMu protein gp461e-22105
NC_015733:1398083:139858013985801398966387Pseudomonas putida S16 chromosome, complete genomephage FluMu protein gp463e-1683.6
NC_009800:2049346:207167220716722072121450Escherichia coli HS, complete genomephage protein GP465e-1373.2
NC_014228:3282500:331080433108043311253450Xenorhabdus nematophila ATCC 19061, complete genomeputative bacteriophage protein6e-1372.8
NC_002937:2933000:295284429528442953320477Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative7e-1062.8
NC_002937:255790:257565257565258041477Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative7e-1062.8
NC_000907:1568867:158883415888341589241408Haemophilus influenzae Rd KW20, complete genomehypothetical protein2e-0961.6