Pre_GI: BLASTP Hits

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Query: NC_010102:1779707:1800707 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1800707, End: 1801114, Length: 408

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:1829357:184176318417631842170408Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-60229
NC_003198:4453457:448272144827214483128408Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative phage tail fibre protein3e-58223
NC_010102:931055:940063940063940638576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-2097.8
NC_011094:2115750:212749021274902128065576Salmonella enterica subsp. enterica serovar Schwarzengrund strtail fiber assembly protein2e-2097.8
NC_011205:2137696:214882021488202149389570Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail fiber assembly protein7e-2095.9
NC_011294:2009388:202051320205132021082570Salmonella enterica subsp. enterica serovar Enteritidis strphage tail protein7e-2095.9
NC_016856:2085283:209563220956322096201570Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tail fiber assembly protein7e-2095.9
NC_016863:2029340:204382420438242044393570Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein7e-2095.9
NC_017046:2026672:204115620411562041725570Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail protein7e-2095.9
NC_016810:2027311:204179520417952042394600Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail protein6e-2095.9
NC_016857:2027311:204179520417952042121327Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tail fiber assembly protein9e-2095.5
NC_008258:269806:274041274041274544504Shigella flexneri 5 str. 8401, complete genomehypothetical protein3e-1580.5
NC_004337:309833:324465324465324899435Shigella flexneri 2a str. 301, complete genomeputative phage tail fibre protein1e-1478.6
NC_007613:1353500:137279113727911373354564Shigella boydii Sb227, complete genomeputative tail fiber assembly protein6e-1372.8
NC_007712:3067000:307497130749713075399429Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-1271.6
NC_011205:1107998:111738411173841117965582Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail fiber assembly like-protein7e-1062.8
NC_011294:1006630:101675710167571017338582Salmonella enterica subsp. enterica serovar Enteritidis strphage tail fiber assembly protein7e-1062.8
NC_011205:1391971:139546013954601396029570Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage tail assembly protein2e-0961.2
NC_011274:1299475:130654113065411307110570Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage tail fiber assembly protein2e-0960.8
NC_011294:1220526:124264112426411242934294Salmonella enterica subsp. enterica serovar Enteritidis str3e-0960.8
NC_004741:310382:316960316960317421462Shigella flexneri 2a str. 2457T, complete genomeputative phage tail fibre protein1e-0755.5
NC_009800:2788164:279908627990862799670585Escherichia coli HS, complete genometail fiber assembly protein1e-0755.1
NC_011094:1923870:1940354194035419416821329Salmonella enterica subsp. enterica serovar Schwarzengrund strside tail fiber protein3e-0753.9
NC_013361:649518:657331657331657903573Escherichia coli O26:H11 str. 11368 chromosome, complete genometail fiber assembly protein9e-0752.4
NC_013941:733286:740261740261740845585Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTail fiber assembly protein9e-0752.4
AC_000091:558920:580757580757581320564Escherichia coli W3110 DNA, complete genome8e-0752.4
NC_000913:558920:580757580757581320564Escherichia coli K12, complete genomeDLP12 prophage; predicted tail fiber assembly protein (pseudogene)8e-0752.4
NC_011080:2722492:273336927333692733947579Salmonella enterica subsp. enterica serovar Newport str. SL254,phage tail assembly protein1e-0652
NC_003197:2720726:273333727333372733915579Salmonella typhimurium LT2, complete genomephage tail assembly-like protein1e-0652
NC_016810:2719779:273102427310242731602579Salmonella enterica subsp. enterica serovar Typhimurium strDNA Binding protein1e-0652
NC_016856:2773995:278486627848662785444579Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage tail assembly-like protein1e-0652
NC_016857:2719779:273102427310242731602579Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage tail assembly-like protein1e-0652
NC_016860:2716152:272874527287452729323579Salmonella enterica subsp. enterica serovar Typhimurium strphage tail assembly protein1e-0652
NC_016863:2721826:273307127330712733649579Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage tail assembly-like protein1e-0652
NC_017046:2717810:273040327304032730981579Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA Binding protein1e-0652
NC_016856:1326503:132894413289441329528585Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage tail assembly-like protein1e-0652
NC_010473:623810:633475633475633912438Escherichia coli str. K-12 substr. DH10B, complete genome1e-0652
NC_010473:498252:520215520215520652438Escherichia coli str. K-12 substr. DH10B, complete genome1e-0652
NC_008258:2045000:205388620538862054155270Shigella flexneri 5 str. 8401, complete genomehypothetical bacteriophage protein2e-0651.6
NC_004741:2009769:202189520218952022164270Shigella flexneri 2a str. 2457T, complete genomeputative bacteriophage protein2e-0651.6
NC_017328:2090679:210082021008202101089270Shigella flexneri 2002017 chromosome, complete genomeputative bacteriophage protein2e-0651.6
NC_010473:1712984:172195917219591722534576Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted tail fibre assembly protein2e-0651.2
AC_000091:1627049:163602416360241636599576Escherichia coli W3110 DNA, complete genomepredicted tail fibre assembly protein2e-0651.2
NC_000913:1625500:163233416323341632909576Escherichia coli K12, complete genomeQin prophage; predicted tail fibre assembly protein2e-0651.2
NC_012759:1517500:152439315243931524968576Escherichia coli BW2952 chromosome, complete genomeQin prophage; tail fiber assembly protein2e-0651.2
NC_011147:1057259:106548110654811065651171Salmonella enterica subsp. enterica serovar Paratyphi A str2e-0651.2
NC_014228:3282500:331458733145873315018432Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-0650.8
NC_016856:1957263:1974881197488119759391059Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage side tail fiber assembly protein3e-0650.8
NC_020064:871338:878066878066878491426Serratia marcescens FGI94, complete genomeCaudovirales tail fiber assembly protein3e-0650.8
NC_011751:1377457:139651413965141397098585Escherichia coli UMN026 chromosome, complete genomeputative tail fiber chaperone; Qin prophage3e-0650.8
AP010958:604719:611775611775612338564Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail fiber assembly protein3e-0650.8
NC_011415:644811:652003652003652578576Escherichia coli SE11 chromosome, complete genomeputative phage tail assembly protein3e-0650.8
NC_013353:604719:611775611775612338564Escherichia coli O103:H2 str. 12009, complete genometail fiber assembly protein3e-0650.8
NC_011080:1944226:196848219684821969363882Salmonella enterica subsp. enterica serovar Newport str. SL254,caudovirales tail fibre assembly protein4e-0650.4
NC_003197:1945858:196347619634761964357882Salmonella typhimurium LT2, complete genomephage-tail assembly-like protein4e-0650.4
NC_016810:1903426:192104419210441921925882Salmonella enterica subsp. enterica serovar Typhimurium strPhage Tail Assembly Protein4e-0650.4
NC_016857:1903426:192104419210441921925882Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage-tail assembly-like protein4e-0650.4
NC_016863:1905454:192307219230721923953882Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage-tail assembly-like protein4e-0650.4
NC_017046:1902788:192040719204071921288882Salmonella enterica subsp. enterica serovar Typhimurium str. 798Phage Tail Assembly Protein4e-0650.4
NC_011740:2737467:275506527550652755649585Escherichia fergusonii ATCC 35469, complete genomeputative tail fibre chaperone; Qin prophage4e-0650.4
NC_009436:1141376:115196011519601152382423Enterobacter sp. 638, complete genomephage tail assembly chaperone gp384e-0650.4
NC_011083:1993672:201249820124982012734237Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative Tail fiber assembly protein homolog from lambdoid prophage4e-0650.1
NC_007712:1182518:119294511929451193556612Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-0650.1
NC_004431:1352906:137255413725541372820267Escherichia coli CFT073, complete genomeHypothetical protein ylcE6e-0649.7
NC_016831:1690811:170841617084161708652237Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-0649.7