Pre_GI: BLASTP Hits

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Query: NC_010102:1779707:1797065 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1797065, End: 1797247, Length: 183

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:2322866:234984223498422350024183Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-28123
NC_010102:4557037:457246245724624572644183Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-28123
NC_010102:3955479:395803139580313958213183Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-28123
NC_013421:2720500:273057227305722730760189Pectobacterium wasabiae WPP163, complete genomehypothetical protein4e-24110
NC_014500:3023762:304697230469723047160189Dickeya dadantii 3937 chromosome, complete genometransposase8e-23105
NC_014500:2589089:259979225997922600022231Dickeya dadantii 3937 chromosome, complete genometransposase7e-23105
NC_017168:4155143:416737141673714167571201Yersinia pestis A1122 chromosome, complete genomeinvasin2e-1684.3
NC_017168:341233:347673347673347828156Yersinia pestis A1122 chromosome, complete genomeinvasin3e-1684
NC_017168:2535732:254756225475622547717156Yersinia pestis A1122 chromosome, complete genomeinvasin3e-1684
NC_016818:4215836:422756242275624227685124Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeSTnc490k Hfq binding RNA2e-1270.9
NC_016818:2542295:254605925460592546182124Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeSTnc490k Hfq binding RNA2e-1270.9