Pre_GI: BLASTP Hits

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Query: NC_010102:1779707:1787044 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1787044, End: 1787217, Length: 174

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:2024458:203179620317962031969174Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-27120
NC_011083:1323827:134006613400661340239174Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-27120
NC_006905:1342474:136664313666431366816174Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-26118
NC_012125:2531817:253915525391552539328174Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-26118
NC_011080:1321268:133680013368001336973174Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein1e-26118
NC_016832:1182496:120114012011401201313174Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-26118
NC_011149:1870931:187826818782681878441174Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-26118
NC_016857:1276340:129187712918771292050174Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-25114
NC_011094:1282385:130168813016881301861174Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-25113
NC_010067:1655815:166307916630791663366288Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-23105
NC_016831:1083871:109800110980011098207207Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-1992.8