Pre_GI: BLASTP Hits

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Query: NC_010102:1779707:1786877 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1786877, End: 1787005, Length: 129

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:1896168:190333819033381903610273Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-1889.4
NC_003197:1320861:133509213350921335364273Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein1e-1788.6
NC_016810:1276340:129194512919451292217273Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1788.6
NC_016856:1326503:134506713450671345339273Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein1e-1788.6
NC_016857:1276340:129194512919451292217273Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-1788.6
NC_016860:1317174:133277913327791333051273Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein1e-1788.6
NC_016863:1277652:129325712932571293529273Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-1788.6
NC_011274:1928939:193610919361091936381273Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-1788.2
NC_004631:1182883:120223612022361202463228Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-0855.8
NC_003198:1771432:177866917786691778896228Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-0855.8