Pre_GI: BLASTP Hits

Some Help

Query: NC_010102:1779707:1783260 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1783260, End: 1783403, Length: 144

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1182496:120495412049541205097144Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-2095.9
NC_016831:1083871:110184111018411101984144Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1890.9
NC_012125:2531817:253537025353702535513144Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1890.9
NC_011205:2024458:202801120280112028154144Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-1890.9
NC_011094:1282385:130550213055021305642141Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1684.3