Pre_GI: BLASTP Hits

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Query: NC_010102:1703172:1712850 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1712850, End: 1713704, Length: 855

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:1408202:141357414135741414428855Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA/RNA non-specific endonuclease8e-161566
NC_016831:1166868:117379411737941174648855Salmonella enterica subsp. enterica serovar Gallinarum/pullorumPutative DNA/RNA non-specific endonuclease6e-159560
NC_011274:1850086:185976418597641860618855Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA/RNA non-specific endonuclease6e-159560
NC_011205:1938574:194824219482421949096855Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA/RNA non-specific endonuclease6e-159560
NC_003197:1401603:140853114085311409385855Salmonella typhimurium LT2, complete genomeputative DNA/RNA non-specific endonuclease2e-158558
NC_016856:1411579:141850714185071419361855Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative DNA/RNA non-specific endonuclease2e-158558
NC_016857:1358456:136538413653841366238855Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative DNA/RNA non-specific endonuclease2e-158558
NC_016860:1399290:140621814062181407072855Salmonella enterica subsp. enterica serovar Typhimurium strputative DNA/RNA non-specific endonuclease2e-158558
NC_006511:1579776:158945515894551590309855Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative DNA/RNA non-specific endonuclease1e-158558
NC_011147:1573470:158463615846361585490855Salmonella enterica subsp. enterica serovar Paratyphi A strDNA/RNA non-specific endonuclease1e-158558
NC_011294:1810285:181995318199531820807855Salmonella enterica subsp. enterica serovar Enteritidis strDNA/RNA non-specific endonuclease2e-158558
NC_016863:1359769:136669713666971367551855Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative DNA/RNA non-specific endonuclease2e-157554
NC_016810:1358456:136540213654021366238837Salmonella enterica subsp. enterica serovar Typhimurium strPutative DNA/RNA non-specific endonuclease2e-156551
NC_017046:1358531:136570513657051366313609Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA/RNA non-specific endonuclease5e-115414
NC_003198:1693623:170330217033021704157856Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-100366
NC_015663:2090442:211708721170872117806720Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA/RNA non-specific endonuclease2e-92338
NC_015379:2417312:242765824276582428524867Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,nuclease1e-84313
NC_015703:4655488:4674730467473046757731044Runella slithyformis DSM 19594 chromosome, complete genomeDNA/RNA non-specific endonuclease8e-1477.8
NC_014364:2111685:211903421190342119798765Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeDNA/RNA non-specific endonuclease1e-0964.3
NC_008609:1976403:201257220125722013363792Pelobacter propionicus DSM 2379, complete genomeDNA/RNA non-specific endonuclease3e-0858.9
NC_015703:5649260:565042356504235651397975Runella slithyformis DSM 19594 chromosome, complete genomeDNA/RNA non-specific endonuclease5e-0858.5
NC_006672:6000:245212452125354834Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceEndonuclease1e-0654.3
NC_005125:2456889:2462385246238524634281044Gloeobacter violaceus PCC 7421, complete genomesugar-non-specific nuclease NucA homolog1e-0653.9