Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1647880 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1647880, End: 1648092, Length: 213

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:1509093:151151315115131511776264Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein5e-34142
NC_011205:1852665:188397918839791884191213Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-34142
NC_011147:1502096:153344515334451533657213Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-34142
NC_011094:1435347:143778814377881438000213Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-34142
NC_003197:1471349:147382014738201474032213Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein5e-34142
NC_006511:1506915:153826415382641538476213Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-34142
NC_004631:1325817:132828813282881328500213Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-34142
NC_011080:1470794:147323514732351473447213Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein5e-34142
NC_011083:1476894:147933514793351479547213Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-34142
NC_011274:1763676:179499217949921795204213Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-34142
NC_011294:1723852:175516717551671755379213Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-34142
NC_016863:1429516:143198714319871432199213Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein5e-34142
NC_016860:1469066:147150714715071471719213Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-34142
NC_016857:1428201:143067214306721430884213Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein5e-34142
NC_016856:1481325:148379614837961484008213Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein5e-34142
NC_016832:1324820:132726113272611327473213Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-34142
NC_016831:1236786:123922812392281239440213Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island protein5e-34142
NC_016810:1428201:143067214306721430884213Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-34142
NC_012125:2360815:239210423921042392316213Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-34142
NC_017046:1428272:143071914307191430955237Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-34142