Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1641513 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1641513, End: 1641896, Length: 384

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011274:1763676:178859817885981788999402Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island 2 effector protein2e-62236
NC_003197:1471349:147999914799991480400402Salmonella typhimurium LT2, complete genomesecreted effector protein4e-62236
NC_016810:1428201:143685114368511437252402Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island 2 secreted effector protein4e-62236
NC_016856:1481325:148997514899751490376402Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein4e-62236
NC_016857:1428201:143685114368511437252402Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein4e-62236
NC_016863:1429516:143816614381661438567402Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein4e-62236
NC_006511:1506915:153189715318971532298402Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island secreted effector protein2e-62236
NC_011147:1502096:152707815270781527479402Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island secreted effector protein2e-62236
NC_016860:1469066:147770414777041478087384Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein6e-62235
NC_004631:1325817:133448413344841334867384Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island secreted effector protein6e-62235
NC_011294:1723852:174877417487741749175402Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island 2 secreted effector protein1e-61234
NC_006905:1509093:151774215177421518143402Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaB1e-61234
NC_012125:2360815:238573723857372386120384Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island effector protein2e-61233