Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1637986 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1637986, End: 1638312, Length: 327

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2360815:238227123822712382597327Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein3e-57220
NC_011294:1723852:174530817453081745634327Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein3e-57220
NC_011147:1502096:152355215235521523878327Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein3e-57220
NC_003198:1621347:164280316428031643129327Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein3e-57220
NC_006511:1506915:152837115283711528697327Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein3e-57220
NC_004631:1325817:133800713380071338333327Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein3e-57220
NC_006905:1509093:152128915212891521615327Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system effector SseA3e-57220
NC_003197:1471349:148360114836011483927327Salmonella typhimurium LT2, complete genomesecretion system chaperone protein8e-57218
NC_016856:1481325:149357714935771493903327Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecretion system chaperone protein8e-57218
NC_016857:1428201:144045314404531440779327Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secretion system chaperone protein8e-57218
NC_016860:1469066:148128814812881481614327Salmonella enterica subsp. enterica serovar Typhimurium strsecretion system chaperone8e-57218
NC_016863:1429516:144176814417681442094327Salmonella enterica subsp. enterica serovar Typhimurium str. UK-13-mercaptopyruvate sulfurtransferase8e-57218
NC_011274:1763676:178513217851321785455324Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein1e-55214
NC_016810:1428201:144051014405101440779270Salmonella enterica subsp. enterica serovar Typhimurium strT3SS chaperone5e-45179
NC_010067:1507823:153288515328851533232348Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-40163