Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1633156 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1633156, End: 1633938, Length: 783

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:1435347:145188014518801452662783Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system effector protein SseF1e-115416
NC_012125:2360815:237744123774412378223783Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island effector protein7e-115413
NC_006905:1509093:152566315256631526445783Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system effector SseF7e-115413
NC_011149:1710601:172722717272271728009783Salmonella enterica subsp. enterica serovar Agona str. SL483,secreted effector protein8e-112403
NC_011274:1763676:178030217803021781084783Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island effector protein3e-111401
NC_011294:1723852:174047817404781741260783Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island effector protein3e-111401
NC_016831:1236786:125334812533481254130783Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island effector protein3e-111401
NC_011083:1476894:149349014934901494272783Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secreted effector protein4e-111400
NC_011147:1502096:151872215187221519504783Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island effector protein5e-111400
NC_006511:1506915:152354115235411524323783Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island effector protein5e-111400
NC_011080:1470794:148741514874151488197783Salmonella enterica subsp. enterica serovar Newport str. SL254,secreted effector protein1e-110399
NC_011205:1852665:186929118692911870073783Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secreted effector protein4e-110397
NC_017046:1428272:144489814448981445680783Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island effector protein7e-110396
NC_003198:1621347:163797316379731638755783Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island effector protein8e-110396
NC_004631:1325817:134238113423811343163783Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island effector protein8e-110396
NC_016832:1324820:134135413413541342136783Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein8e-110396
NC_003197:1471349:148797514879751488757783Salmonella typhimurium LT2, complete genomesecreted effector protein7e-110396
NC_016810:1428201:144482714448271445609783Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island effector protein7e-110396
NC_016856:1481325:149795114979511498733783Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein7e-110396
NC_016857:1428201:144482714448271445609783Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein7e-110396
NC_016860:1469066:148566214856621486444783Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein7e-110396
NC_016863:1429516:144614214461421446924783Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein7e-110396
NC_010067:1507823:152804415280441528769726Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-74278