Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1632470 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1632470, End: 1633159, Length: 690

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2360815:237675523767552377444690Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island effector protein5e-116416
NC_003197:1471349:148875414887541489443690Salmonella typhimurium LT2, complete genomesecreted effector protein6e-116416
NC_016810:1428201:144560614456061446295690Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island effector protein6e-116416
NC_016856:1481325:149873014987301499419690Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecreted effector protein6e-116416
NC_016857:1428201:144560614456061446295690Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secreted effector protein6e-116416
NC_016860:1469066:148644114864411487130690Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein6e-116416
NC_016863:1429516:144692114469211447610690Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein6e-116416
NC_006905:1509093:152644215264421527131690Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system effector SseG5e-116416
NC_011080:1470794:148819414881941488883690Salmonella enterica subsp. enterica serovar Newport str. SL254,secreted effector protein2e-115415
NC_011205:1852665:186860518686051869294690Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secreted effector protein2e-115415
NC_011274:1763676:177961617796161780305690Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island effector protein2e-115415
NC_011294:1723852:173979217397921740481690Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island effector protein2e-115415
NC_016831:1236786:125412712541271254816690Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island effector protein6e-115413
NC_011147:1502096:151803615180361518725690Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island effector protein1e-114412
NC_006511:1506915:152285515228551523544690Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island effector protein1e-114412
NC_003198:1621347:163728716372871637976690Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island effector protein8e-114409
NC_004631:1325817:134316013431601343849690Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island effector protein8e-114409
NC_016832:1324820:134213313421331342822690Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein8e-114409
NC_011094:1435347:145265914526591453348690Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system effector protein SseG1e-113408
NC_011083:1476894:149437114943711494958588Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secretion system effector SseG2e-94345
NC_011149:1710601:172654117265411727083543Salmonella enterica subsp. enterica serovar Agona str. SL483,secreted effector protein2e-84311
NC_010067:1507823:152735515273551527945591Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-79295
NC_017046:1428272:144604614460461446366321Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island effector protein3e-57221