Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1632161 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1632161, End: 1632376, Length: 216

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:1509093:152717415271741527440267Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaG3e-34143
NC_011147:1502096:151772715177271517942216Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein4e-34142
NC_011094:1435347:145344114534411453656216Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus needle protein4e-34142
NC_003197:1471349:148953714895371489752216Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein4e-34142
NC_004631:1325817:134394313439431344158216Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein4e-34142
NC_011149:1710601:172623217262321726447216Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus needle protein4e-34142
NC_011080:1470794:148897714889771489192216Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus needle protein4e-34142
NC_006511:1506915:152254615225461522761216Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein4e-34142
NC_003198:1621347:163697816369781637193216Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein4e-34142
NC_011083:1476894:149505214950521495267216Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus needle protein4e-34142
NC_011205:1852665:186829618682961868511216Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus needle protein4e-34142
NC_011274:1763676:177930717793071779522216Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein4e-34142
NC_011294:1723852:173948317394831739698216Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein4e-34142
NC_017046:1428272:144646014464601446675216Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein4e-34142
NC_016863:1429516:144770414477041447919216Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein4e-34142
NC_016860:1469066:148722414872241487439216Salmonella enterica subsp. enterica serovar Typhimurium strsecretion system apparatus protein SsaG4e-34142
NC_016857:1428201:144638914463891446604216Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secretion system apparatus protein SsaG4e-34142
NC_016856:1481325:149951314995131499728216Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein4e-34142
NC_016832:1324820:134291613429161343131216Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion apparatus needle protein4e-34142
NC_016831:1236786:125491012549101255125216Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein4e-34142
NC_016810:1428201:144638914463891446604216Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein4e-34142
NC_012125:2360815:237644623764462376661216Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein4e-34142
NC_010067:1507823:152704315270431527258216Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-32135
NC_014012:2565329:257368425736842573899216Shewanella violacea DSS12, complete genometype III secretion system apparatus protein, putative1e-1581.6
NC_005085:2774370:278730127873012787516216Chromobacterium violaceum ATCC 12472, complete genomesecretion system apparatus6e-1579.3
NC_012779:916000:933086933086933307222Edwardsiella ictaluri 93-146, complete genometype III secretion apparatus needle protein, putative1e-0962
NC_002695:4584177:459037245903724590593222Escherichia coli O157:H7 str. Sakai, complete genomeEscF6e-0856.2
AP010958:3669500:368025536802553680476222Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscF6e-0856.2
NC_011353:4688000:469347646934764693697222Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus needle protein6e-0856.2
NC_011601:4096427:410426041042604104481222Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscF6e-0856.2
NC_013008:4643825:464951746495174649738222Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system component6e-0856.2
NC_013353:3669500:368025536802553680476222Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscF6e-0856.2
NC_013361:5319497:536332453633245363545222Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscF6e-0856.2
NC_013364:3701895:372187937218793722100222Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscF6e-0856.2
NC_013941:4470932:447788244778824478103222Escherichia coli O55:H7 str. CB9615 chromosome, complete genometype III secretion apparatus needle protein6e-0856.2
NC_002655:4653160:465935546593554659576222Escherichia coli O157:H7 EDL933, complete genomeescF6e-0856.2