Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1631893 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1631893, End: 1632183, Length: 291

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:1507823:152677515267751527002228Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1786.7
NC_012125:2360815:237617823761782376420243Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein5e-24109
NC_011294:1723852:173921517392151739442228Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein1e-21102
NC_011147:1502096:151745915174591517686228Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein1e-21102
NC_011274:1763676:177903917790391779266228Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein1e-21102
NC_016831:1236786:125510312551031255393291Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein6e-33139
NC_006511:1506915:152227815222781522505228Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein1e-21102
NC_004631:1325817:134419913441991344426228Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein2e-21101
NC_003198:1621347:163671016367101636937228Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein2e-21101
NC_016857:1428201:144658214465821446872291Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secretion system apparatus protein SsaH6e-33139
NC_006905:1509093:152741815274181527708291Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaH6e-33139
NC_011205:1852665:186802818680281868318291Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853SsaH family type III secretion system protein6e-33139
NC_016856:1481325:149976914997691499996228Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein1e-21102
NC_016863:1429516:144796014479601448187228Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein1e-21102
NC_003197:1471349:148979314897931490020228Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein1e-21102
NC_011094:1435347:145369714536971453924228Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion system protein SsaH1e-21102
NC_016832:1324820:134310913431091343399291Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion system protein, SsaH1e-32138
NC_011080:1470794:148917014891701489460291Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion system protein, SsaH family6e-33139
NC_016860:1469066:148741714874171487707291Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system protein, SsaH family6e-33139
NC_011149:1710601:172596417259641726254291Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion system protein, SsaH family6e-33139
NC_011083:1476894:149524514952451495535291Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion system protein, SsaH family6e-33139
NC_017046:1428272:144670114467011446943243Salmonella enterica subsp. enterica serovar Typhimurium str. 798type three secretion system apparatus5e-24109
NC_016810:1428201:144664514466451446872228Salmonella enterica subsp. enterica serovar Typhimurium strType three secretion system apparatus1e-21102