Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1631633 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1631633, End: 1631896, Length: 264

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:1469066:148770414877041487967264Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus protein9e-44175
NC_016831:1236786:125539012553901255653264Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein9e-44175
NC_011205:1852665:186776818677681868031264Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion system apparatus protein9e-44175
NC_011080:1470794:148945714894571489720264Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion system apparatus protein9e-44175
NC_011083:1476894:149553214955321495795264Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion system apparatus protein2e-43173
NC_016832:1324820:134339613433961343659264Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion system apparatus protein3e-41167
NC_011094:1435347:145392114539211454184264Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion system apparatus protein3e-41167
NC_011149:1710601:172570417257041725967264Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion system apparatus protein1e-40165
NC_006511:1506915:152201815220181522266249Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein6e-41165
NC_003197:1471349:149003214900321490280249Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein6e-41165
NC_011147:1502096:151719915171991517447249Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein6e-41165
NC_011274:1763676:177877917787791779027249Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein6e-41165
NC_011294:1723852:173895517389551739203249Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein6e-41165
NC_016810:1428201:144688414468841447132249Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein6e-41165
NC_016856:1481325:150000815000081500256249Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein6e-41165
NC_016857:1428201:144688414468841447132249Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74type III secretion system apparatus protein6e-41165
NC_016863:1429516:144819914481991448447249Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein6e-41165
NC_012125:2360815:237591823759182376166249Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein2e-39160
NC_006905:1509093:152772015277201527968249Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaI5e-39159
NC_003198:1621347:163645016364501636698249Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein2e-38157
NC_004631:1325817:134443813444381344686249Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein2e-38157
NC_017046:1428272:144703914470391447203165Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein7e-24108
NC_010067:1507823:152650315265031526724222Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1788.6