Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1628668 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1628668, End: 1629633, Length: 966

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1502096:151423415142341515226993Salmonella enterica subsp. enterica serovar Paratyphi A strsecretion system protein1e-163575
NC_006511:1506915:151905315190531520045993Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative secretion system protein1e-163575
NC_011294:1723852:1735990173599017370061017Salmonella enterica subsp. enterica serovar Enteritidis strsecretion system protein2e-163574
NC_011274:1763676:1775814177581417768301017Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91secretion system protein2e-163574
NC_011080:1470794:149169314916931492685993Salmonella enterica subsp. enterica serovar Newport str. SL254,secretion system apparatus protein SsaL8e-163573
NC_011205:1852665:186480318648031865795993Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion system apparatus protein SsaL8e-163573
NC_016831:1236786:125762612576261258618993Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative secretion system protein8e-163573
NC_003197:1471349:1492229149222914932451017Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein2e-162571
NC_016810:1428201:1449081144908114500971017Salmonella enterica subsp. enterica serovar Typhimurium strputative secretion system protein2e-162571
NC_016856:1481325:1502205150220515032211017Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein2e-162571
NC_016857:1428201:1449081144908114500971017Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74type III secretion system apparatus protein2e-162571
NC_016863:1429516:1450396145039614514121017Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein2e-162571
NC_017046:1428272:1449152144915214501681017Salmonella enterica subsp. enterica serovar Typhimurium str. 798secretion system protein2e-162571
NC_011149:1710601:172273917227391723731993Salmonella enterica subsp. enterica serovar Agona str. SL483,secretion system apparatus protein SsaL2e-162571
NC_012125:2360815:237295323729532373918966Salmonella enterica subsp. enterica serovar Paratyphi C strainsecretion system protein3e-162570
NC_006905:1509093:1529917152991715309331017Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaL5e-162570
NC_016860:1469066:148994014899401490932993Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus protein6e-162570
NC_011083:1476894:149779514977951498760966Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secretion system apparatus protein SsaL7e-162570
NC_011094:1435347:145615714561571457149993Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system apparatus protein SsaL2e-161568
NC_016832:1324820:134563213456321346624993Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secretion system apparatus protein ssaL4e-160563
NC_004631:1325817:134665913466591347651993Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative secretion system protein4e-160563
NC_003198:1621347:163348516334851634477993Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secretion system protein4e-160563
NC_010067:1507823:152353815235381524530993Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-149527
NC_005085:2774370:2789646278964627907521107Chromobacterium violaceum ATCC 12472, complete genomeSecretion system apparatus4e-1789
NC_002655:4653160:4662759466275946638141056Escherichia coli O157:H7 EDL933, complete genomesepL6e-1272
NC_002695:4584177:4593776459377645948311056Escherichia coli O157:H7 str. Sakai, complete genomeSepL6e-1272
NC_011353:4688000:4696880469688046979351056Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein SepL6e-1272
NC_013008:4643825:4652921465292146539761056Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system component6e-1272
NC_013941:4470932:4481286448128644823411056Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeSepL6e-1272
NC_012779:916000:9296209296209306451026Edwardsiella ictaluri 93-146, complete genomeEsaL, putative5e-1272
NC_013364:3701895:3725324372532437263791056Escherichia coli O111:H- str. 11128, complete genomesecretion switching protein SepL1e-1170.5
NC_014012:2565329:2569813256981325708411029Shewanella violacea DSS12, complete genomesecretion system apparatus protein ssaL, putative4e-1169.3
NC_013361:5319497:5359062535906253601171056Escherichia coli O26:H11 str. 11368 chromosome, complete genomesecretion switching protein SepL2e-1067
NC_011601:4096427:4107708410770841087631056Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomesecretion switching protein SpeL3e-1066.2
NC_013353:3669500:3683683368368336847381056Escherichia coli O103:H2 str. 12009, complete genomesecretion switching protein SepL3e-1066.2
AP010958:3669500:3683683368368336847381056Escherichia coli O103:H2 str. 12009 DNA, complete genomesecretion switching protein SepL3e-1066.2