Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1624186 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1624186, End: 1624560, Length: 375

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:1507823:151905915190591519430372Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-57220
NC_011149:1710601:171825717182571718550294Salmonella enterica subsp. enterica serovar Agona str. SL483,secretion system apparatus protein SsaP2e-51200
NC_006905:1509093:153504115350411535415375Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaP3e-68256
NC_011205:1852665:186032118603211860662342Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion system apparatus protein SsaP9e-63238
NC_011294:1723852:173150817315081731882375Salmonella enterica subsp. enterica serovar Enteritidis strtype III secretion protein3e-69259
NC_011274:1763676:177133217713321771706375Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type III secretion protein3e-69259
NC_016831:1236786:126275912627591263100342Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type III secretion protein9e-63238
NC_011080:1470794:149682614968261497167342Salmonella enterica subsp. enterica serovar Newport str. SL254,secretion system apparatus protein SsaP9e-63238
NC_011147:1502096:150975215097521510126375Salmonella enterica subsp. enterica serovar Paratyphi A strtype III secretion protein9e-69258
NC_006511:1506915:151457115145711514945375Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative type III secretion protein9e-69258
NC_012125:2360815:236847123684712368845375Salmonella enterica subsp. enterica serovar Paratyphi C straintype III secretion protein3e-68256
NC_011094:1435347:146129014612901461631342Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system apparatus protein SsaP4e-62236
NC_003198:1621347:162900316290031629377375Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative type III secretion protein3e-69259
NC_016860:1469066:149504014950401495414375Salmonella enterica subsp. enterica serovar Typhimurium strputative type III secretion protein3e-69259
NC_016856:1481325:150732915073291507703375Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein3e-69259
NC_016863:1429516:145552014555201455894375Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein3e-69259
NC_003197:1471349:149735314973531497727375Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein3e-69259