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Query: NC_010102:1616530:1622259 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1622259, End: 1622525, Length: 267

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1429516:145755514575551457821267Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein1e-33141
NC_011274:1763676:176940517694051769671267Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type III secretion protein1e-33141
NC_003197:1471349:149938814993881499654267Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein1e-33141
NC_006511:1506915:151264415126441512910267Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative type III secretion protein1e-33141
NC_011094:1435347:146329214632921463558267Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system apparatus protein SsaS1e-33141
NC_011147:1502096:150782515078251508091267Salmonella enterica subsp. enterica serovar Paratyphi A strtype III secretion protein1e-33141
NC_011294:1723852:172958117295811729847267Salmonella enterica subsp. enterica serovar Enteritidis strtype III secretion protein1e-33141
NC_012125:2360815:236654423665442366810267Salmonella enterica subsp. enterica serovar Paratyphi C straintype III secretion protein1e-33141
NC_016856:1481325:150936415093641509630267Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein1e-33141
NC_016860:1469066:149707514970751497341267Salmonella enterica subsp. enterica serovar Typhimurium strputative type III secretion protein1e-33141
NC_003198:1621347:162707616270761627342267Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative type III secretion protein2e-33140
NC_010067:1507823:151713415171341517400267Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-33139
NC_016831:1236786:126491412649141265027114Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type III secretion protein4e-1476.6
NC_011205:1852665:185839418583941858507114Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion system apparatus protein SsaS4e-1476.6
NC_005126:4423964:443890444389044439170267Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctS3e-0960.5
NC_009997:2699644:270178227017822702051270Shewanella baltica OS195, complete genometype III secretion protein, HrpO family6e-0959.7
NC_012962:1189021:119535111953511195617267Photorhabdus asymbiotica, complete genometype iii secretion component protein scts2e-0857.8
NC_013361:5319497:533663653366365336905270Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscS2e-0754.7
NC_013353:3669500:370697637069763707245270Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscS2e-0754.7
AP010958:3669500:370697637069763707245270Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscS2e-0754.7
NC_013941:4470932:450456745045674504839273Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeEscS3e-0753.9
NC_002695:4584177:461706346170634617332270Escherichia coli O157:H7 str. Sakai, complete genomeEscS3e-0753.9
NC_002655:4653160:468604646860464686315270Escherichia coli O157:H7 EDL933, complete genomeescS3e-0753.9
NC_011601:4096427:413082941308294131098270Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscS3e-0753.9
NC_013008:4643825:467620846762084676477270Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor3e-0753.9
NC_013364:3701895:374847037484703748739270Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscS3e-0753.9
NC_008011:663958:668846668846669106261Lawsonia intracellularis PHE/MN1-00, complete genomeprobable translocation protein in type III secretion2e-0651.2
NC_007645:3343815:335881133588113359080270Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, component EscS2e-0651.2
NC_015376:345347:361791361791362054264Burkholderia gladioli BSR3 chromosome chromosome 2, completeType III secretion inner membrane protein SctS3e-0650.8
NC_007519:3527207:354193335419333542202270Desulfovibrio alaskensis G20 chromosome, complete genomeflagellar biosynthetic protein FliQ6e-0649.7
NC_021184:2238500:225807322580732258342270Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliQ7e-0649.3