Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1621479 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1621479, End: 1622126, Length: 648

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:1470794:149909514990951499874780Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein SpaR/YscT/HrcT5e-114409
NC_011205:1852665:185761418576141858393780Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein SpaR/YscT/HrcT5e-114409
NC_003198:1621347:162629616262961627075780Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative type III secretion protein9e-114409
NC_012125:2360815:236576423657642366543780Salmonella enterica subsp. enterica serovar Paratyphi C straintype III secretion protein2e-113408
NC_006511:1506915:151186415118641512643780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative type III secretion protein3e-113407
NC_011147:1502096:150704515070451507824780Salmonella enterica subsp. enterica serovar Paratyphi A strtype III secretion protein3e-113407
NC_011149:1710601:171555017155501716329780Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein SpaR/YscT/HrcT2e-113407
NC_011094:1435347:146355914635591464338780Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein SpaR/YscT/HrcT2e-113407
NC_011294:1723852:172880117288011729580780Salmonella enterica subsp. enterica serovar Enteritidis strtype III secretion protein2e-113407
NC_011274:1763676:176862517686251769404780Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type III secretion protein5e-113406
NC_016863:1429516:145782214578221458601780Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein8e-113405
NC_016860:1469066:149734214973421498121780Salmonella enterica subsp. enterica serovar Typhimurium strputative type III secretion protein8e-113405
NC_016856:1481325:150963115096311510410780Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein8e-113405
NC_003197:1471349:149965514996551500434780Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein8e-113405
NC_016831:1236786:126502812650281265807780Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type III secretion protein1e-111401
NC_010067:1507823:151635415163541517133780Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-109394
NC_016901:2661971:266197126619712662771801Shewanella baltica OS678 chromosome, complete genometype III secretion protein SpaR/YscT/HrcT3e-48191
NC_009997:2699644:270205427020542702854801Shewanella baltica OS195, complete genometype III secretion protein SpaR/YscT/HrcT3e-48191
NC_011601:4096427:413005341300534130829777Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscT1e-30132
NC_013361:5319497:533690553369055337681777Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscT2e-30132
NC_013353:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscT2e-30132
AP010958:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscT2e-30132
NC_002655:4653160:468527046852704686046777Escherichia coli O157:H7 EDL933, complete genomeescT5e-30130
NC_002695:4584177:461628746162874617063777Escherichia coli O157:H7 str. Sakai, complete genomeEscT5e-30130
NC_011353:4688000:471939147193914720167777Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus protein SpaR/YscT/HrcT5e-30130
NC_013008:4643825:467543246754324676208777Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor5e-30130
NC_013364:3701895:374769437476943748470777Escherichia coli O111:H- str. 11128, complete genomeputative T3SS structure protein EscT5e-30130
NC_013941:4470932:450379145037914504567777Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeescT5e-30130
NC_005126:4423964:443916744391674439955789Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctT1e-1996.7
NC_007645:3343815:335798933579893358774786Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, component EscT1e-1996.3
NC_012962:1189021:119456611945661195354789Photorhabdus asymbiotica, complete genometype iii secretion component protein sctt2e-1995.9
NC_008011:663958:669154669154669969816Lawsonia intracellularis PHE/MN1-00, complete genomeType III secretion component protein SctT1e-1582.8
NC_020291:4903981:4924711492471149265491839Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthetic protein FlhB2e-1479.3
NC_016902:903241:913892913892914659768Escherichia coli KO11FL chromosome, complete genometype III secretion protein SpaR/YscT/HrcT6e-1477.4
NC_013364:3552284:357458735745873575354768Escherichia coli O111:H- str. 11128, complete genometype III secretion protein EpaR6e-1477.4
NC_013361:3867558:388985638898563890623768Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion protein EpaR6e-1477.4
NC_011415:3217796:324009432400943240861768Escherichia coli SE11 chromosome, complete genomeputative type III secretion protein6e-1477.4
CP002185:3167738:319141731914173192184768Escherichia coli W, complete genometype III secretion system protein6e-1477.4
CP002516:903241:913892913892914659768Escherichia coli KO11, complete genometype III secretion protein SpaR/YscT/HrcT6e-1477.4
NC_011751:3285646:330819233081923308959768Escherichia coli UMN026 chromosome, complete genomeputative type III secretion protein EpaR1e-1376.6
NC_010674:858397:8725658725658744061842Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthetic protein1e-1376.6
NC_013971:1660144:168608816860881686858771Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein2e-1376.3
NC_013961:1622616:164856016485601649330771Erwinia amylovora, complete genomeSurface presentation of antigens protein SpaR2e-1376.3
NC_006351:1886475:190716619071661907984819Burkholderia pseudomallei K96243 chromosome 2, complete sequencetype III secretion-associated protein2e-1375.9
NC_009075:1906915:192599819259981926816819Burkholderia pseudomallei 668 chromosome II, complete sequencetype III secretion protein SpaR/YscT/HrcT2e-1375.9
NC_007435:566436:587396587396588214819Burkholderia pseudomallei 1710b chromosome II, complete sequencetype III secretion protein SpaR/YscT/HrcT2e-1375.9
NC_009800:2995958:302064530206453021412768Escherichia coli HS, complete genometype III secretion apparatus protein EpaR3e-1375.5
NC_010468:906957:917613917613918380768Escherichia coli ATCC 8739, complete genometype III secretion protein SpaR/YscT/HrcT3e-1375.5
CU928145:3196173:321850832185083219275768Escherichia coli 55989 chromosome, complete genomeputative Type III secretion protein EpaR3e-1375.1
NC_011748:3196173:321850832185083219275768Escherichia coli 55989, complete genomeputative Type III secretion protein EpaR3e-1375.1
NC_010723:833870:8508728508728527041833Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthetic protein4e-1374.7
NC_010694:2138000:215439321543932155121729Erwinia tasmaniensis, complete genomeType III secretion apparatus5e-1374.7
CU928160:3030324:305262330526233053390768Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion protein EpaR9e-1373.6
AP010958:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009 DNA, complete genometype III secretion protein EpaR9e-1373.6
NC_011741:3030324:305262330526233053390768Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion protein EpaR9e-1373.6
NC_013353:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009, complete genometype III secretion protein EpaR9e-1373.6
NC_009801:3175714:319800931980093198776768Escherichia coli E24377A, complete genometype III secretion apparatus protein EpaR3e-1272
NC_013971:2876733:289699928969992897763765Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein3e-1272
NC_013961:851044:873537873537874301765Erwinia amylovora, complete genomeSurface presentation of antigens protein spaR3e-1272
NC_010694:2971170:299086429908642991628765Erwinia tasmaniensis, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus3e-1272
NC_014366:2513352:251499225149922515783792Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein4e-1271.2
NC_009617:4911595:4913794491379449156351842Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB1e-1170.1
NC_009012:574145:595409595409596194786Clostridium thermocellum ATCC 27405, complete genometype III secretion system inner membrane R protein2e-1169.3
NC_021182:2883716:2896408289640828982371830Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR2e-1169.3
NC_014652:628435:650982650982651764783Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein flir3e-1168.9
NC_015391:2059191:207640620764062077098693Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliR3e-1168.6
NC_014377:1089894:108913310891331089897765Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar biosynthetic protein FliR6e-1167.4
NC_012214:2221702:224179622417962242566771Erwinia pyrifoliae Ep1/96, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus8e-1063.9
NC_010520:2860960:2860960286096028627891830Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthetic protein FliR/FlhB2e-0962.8
NC_014328:1135854:1144086114408611459061821Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional flagellar biosynthesis proteins FliR/FlhB2e-0962.4
NC_008593:1103293:1122918112291811246451728Clostridium novyi NT, complete genomeflagellar biosynthetic protein FlhB4e-0961.6
NC_009698:2649453:2649453264945326512821830Clostridium botulinum A str. Hall chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB7e-0960.8
NC_009664:533021:536377536377537201825Kineococcus radiotolerans SRS30216, complete genomeflagellar biosynthetic protein FliR7e-0960.5
NC_004129:1848701:185379718537971854564768Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein6e-0857.8
NC_010501:4080937:409588040958804096656777Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliR7e-0857.4
NC_010688:3487000:350447635044763505306831Xanthomonas campestris pv. campestris, complete genomeHrcT protein1e-0757
NC_007086:3582500:359973635997363600566831Xanthomonas campestris pv. campestris str. 8004, complete genomeHrpB8 protein1e-0757
NC_003902:1442705:144321114432111444041831Xanthomonas campestris pv. campestris str. ATCC 33913, completeHrpB8 protein1e-0757
NC_017271:1517820:151829615182961519126831Xanthomonas campestris pv. raphani 756C chromosome, completetype III secretion protein HrcT1e-0757
NC_018664:1663324:166832816683281669122795Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthesis protein FliR1e-0756.6
NC_007508:479799:482317482317483147831Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeHrcT protein3e-0755.5
NC_020418:14965:275152751528276762Morganella morganii subsp. morganii KT, complete genomeType III secretion inner membrane protein3e-0755.5
NC_013722:1689125:172499717249971725767771Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein7e-0754.3
NC_021184:2238500:225729222572922258059768Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliR9e-0753.9
NC_008346:983816:984925984925985686762Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeflagellar biosynthetic protein FliR7e-0753.9
NC_002947:4931476:494658249465824947358777Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein2e-0652.8
NC_015858:1150446:117293811729381173705768Brucella pinnipedialis B2/94 chromosome chromosome 2, completeflagellar biosynthesis protein FliR2e-0652.8
NC_013851:3300278:330354133035413304323783Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliR2e-0652.4
NC_009512:1691930:169690316969031697679777Pseudomonas putida F1, complete genomeflagellar biosynthetic protein FliR2e-0652.4
NC_017986:4374979:437995243799524380728777Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliR2e-0652.4
NC_007624:1046500:106925310692531070020768Brucella melitensis biovar Abortus 2308 chromosome II, completeBacterial export protein, family 1:Flagellar biosynthesis protein FliR2e-0652.4
NC_006933:1051873:107449710744971075264768Brucella abortus biovar 1 str. 9-941 chromosome II, completeflagellar biosynthesis protein2e-0652.4
NC_010740:1051000:107375410737541074521768Brucella abortus S19 chromosome 2, complete sequenceFlagellar biosynthesis protein FliR2e-0652.4
NC_013118:1109610:113232211323221133089768Brucella microti CCM 4915 chromosome 2, complete genomeflagellar biosynthesis protein FliR2e-0652.4
NC_004311:1096649:111938511193851120152768Brucella suis 1330 chromosome II, complete sequenceflagellar biosynthesis protein2e-0652.4
NC_010104:1096081:111881711188171119584768Brucella canis ATCC 23365 chromosome II, complete sequenceflagellar biosynthetic protein FliR2e-0652.4
NC_016894:2931213:293522829352282935983756Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar biosynthesis protein FliR3e-0652
NC_012660:819381:821326821326822114789Pseudomonas fluorescens SBW25 chromosome, complete genomeputative type III secretion protein4e-0651.6
NC_016863:2974333:300108030010803001871792Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex export protein6e-0651.2
NC_016860:3029272:305602030560203056811792Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus protein SpaR/YscT/HrcT6e-0651.2
NC_016857:3028421:305516630551663055957792Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex export protein6e-0651.2
NC_016856:3026426:305282730528273053618792Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex export protein6e-0651.2
NC_016810:3028421:305516630551663055957792Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system secretory apparatus6e-0651.2
NC_012125:2938519:296650129665012967292792Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence associated secretory protein6e-0651.2
NC_010102:2967464:299557229955722996363792Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0651.2
NC_003197:3005842:303259030325903033381792Salmonella typhimurium LT2, complete genomeneedle complex export protein6e-0651.2
NC_011149:2912219:294111629411162941907792Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein SpaR/YscT/HrcT6e-0651.2
NC_017046:3027161:305390630539063054697792Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system secretory apparatus6e-0651.2
NC_011094:2913500:293978629397862940577792Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein SpaR/YscT/HrcT5e-0651.2
NC_003198:2856596:288459028845902885381792Salmonella enterica subsp. enterica serovar Typhi str. CT18,secretory protein (associated with virulence)5e-0651.2
NC_016831:2867766:289451428945142895305792Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsecretory protein (associated with virulence)5e-0651.2
NC_011294:2890500:291725029172502918041792Salmonella enterica subsp. enterica serovar Enteritidis strsecretory protein5e-0651.2
NC_011274:2881306:290805429080542908845792Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence associated secretory protein5e-0651.2
NC_011205:3050235:307698730769873077778792Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein SpaR/YscT/HrcT5e-0651.2
NC_011147:2814664:284266228426622843453792Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence secretory protein5e-0651.2
NC_006511:2819128:284712628471262847917792Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsecretory protein (associated with virulence)5e-0651.2
NC_011080:2982346:300909430090943009885792Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein SpaR/YscT/HrcT5e-0651.2
NC_016832:2829767:285774628577462858537792Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Surface presentation of antigens protein spaR5e-0651.2
NC_004631:2842453:287044728704472871238792Salmonella enterica subsp. enterica serovar Typhi Ty2, completevirulence-associated secretory protein5e-0651.2
NC_011353:3805819:382867738286773829144468Escherichia coli O157:H7 str. EC4115 chromosome, complete genome6e-0650.8
NC_002655:3769643:379158537915853792037453Escherichia coli O157:H7 EDL933, complete genometype III secretion apparatus protein7e-0650.4
NC_014926:1381152:141077914107791411558780Thermovibrio ammonificans HB-1 chromosome, complete genomeflagellar biosynthetic protein FliR9e-0650.4
NC_015761:2726000:275218927521892752980792Salmonella bongori NCTC 12419, complete genomevirulence associated secretory protein9e-0650.4