Pre_GI: BLASTP Hits

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Query: NC_010102:1388344:1414521 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1414521, End: 1415723, Length: 1203

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2143246:2169433216943321706381206Salmonella enterica subsp. enterica serovar Paratyphi C strainglycolate oxidase0783
NC_003198:1378457:1396641139664113978431203Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative glycolate oxidase0783
NC_011205:1633353:1659562165956216606981137Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853L-lactate oxidase0726
NC_012984:3077004:3096118309611830972181101Lactobacillus plantarum JDM1, complete genomelactate oxidase1e-107390
NC_013199:2386924:2393109239310923942241116Lactobacillus rhamnosus Lc 705, complete genomeL-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase8e-104377
NC_010999:2483000:2485994248599424871091116Lactobacillus casei, complete genomeNAD-independent L-lactate dehydrogenase3e-100365
NC_020995:2636519:2640621264062126417241104Enterococcus casseliflavus EC20, complete genomeL-lactate oxidase2e-86320
NC_013730:2187898:2194127219412721951761050Spirosoma linguale DSM 74, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase8e-56218
NC_020126:3383902:3387540338754033887631224Myxococcus stipitatus DSM 14675, complete genome(S)-2-hydroxy-acid oxidase3e-53209
NC_018644:516157:5186995186995198561158Alpha proteobacterium HIMB59 chromosome, complete genomedehydrogenase, FMN-dependent3e-52206
NC_013501:1691532:1709845170984517110351191Rhodothermus marinus DSM 4252, complete genomeLactate 2-monooxygenase7e-52204
NC_017187:691769:7003927003927014681077Arcobacter butzleri ED-1, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase1e-50201
NC_008253:3941938:3966658396665839678871230Escherichia coli 536, complete genomeputative FMN-dependent dehydrogenase2e-50200
NC_007946:4779745:4807909480790948091261218Escherichia coli UTI89, complete genomeputative FMN-dependent dehydrogenase6e-50198
NC_018643:1309804:1315929131592913170801152Alpha proteobacterium HIMB5 chromosome, complete genomedehydrogenase, FMN-dependent2e-48193
NC_010505:2690939:2704608270460827057531146Methylobacterium radiotolerans JCM 2831, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase2e-48193
NC_013016:1257942:1271346127134612725871242Neisseria meningitidis alpha14 chromosome, complete genomeL-lactate dehydrogenase1e-47191
NC_002946:618439:6259916259916271631173Neisseria gonorrhoeae FA 1090, complete genomeputative L-lactate dehydrogenase1e-47191
NC_017516:917817:9255519255519267111161Neisseria meningitidis H44/76 chromosome, complete genomeL-lactate dehydrogenase1e-47191
NC_017517:1377617:1389198138919813903581161Neisseria meningitidis M01-240355 chromosome, complete genomeL-lactate dehydrogenase1e-47191
NC_011035:1033942:1045422104542210465941173Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative L-lactate dehydrogenase1e-47191
NC_017511:950411:9612479612479624191173Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative L-lactate dehydrogenase1e-47191
NC_003116:1488576:1499437149943715006091173Neisseria meningitidis Z2491, complete genomeL-lactate dehydrogenase1e-47191
NC_017505:1338661:1351557135155713527291173Neisseria meningitidis alpha710 chromosome, complete genomeL-lactate dehydrogenase1e-47191
NC_017512:1264542:1275403127540312765751173Neisseria meningitidis WUE 2594, complete genomeL-lactate dehydrogenase (cytochrome)1e-47191
NC_008314:477722:5187525187525198971146Ralstonia eutropha H16 chromosome 2, complete sequenceL-Lactate cytochrome reductase1e-47190
NC_012721:182965:2045582045582056761119Burkholderia glumae BGR1 chromosome 2, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase2e-46186
NC_014311:1309562:1327676132767613288271152Ralstonia solanacearum PSI07 chromosome, complete genomeL-lactate dehydrogenase, FMN-linked2e-45183
NC_008312:3793760:3834377383437738355341158Trichodesmium erythraeum IMS101, complete genomeL-lactate dehydrogenase (cytochrome)8e-43174
NC_012590:850130:8725578725578738251269Corynebacterium aurimucosum ATCC 700975, complete genomeL-lactate dehydrogenase2e-42173
NC_004547:138500:1402681402681414281161Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeL-lactate dehydrogenase3e-42172
NC_012917:4646491:4660211466021146613711161Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase4e-42172
NC_015514:3307199:3340787334078733419981212Cellulomonas fimi ATCC 484 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase4e-42172
NC_010677:1621500:1657548165754816587051158Francisella tularensis subsp. mediasiatica FSC147, complete genomeL-lactate dehydrogenase4e-41169
NC_012660:4734363:4747036474703647481931158Pseudomonas fluorescens SBW25 chromosome, complete genomeL-lactate dehydrogenase5e-41168
NC_012721:137046:1455441455441467071164Burkholderia glumae BGR1 chromosome 2, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase6e-41168
NC_014318:2252417:2255570225557022567811212Amycolatopsis mediterranei U32 chromosome, complete genomeL-lactate dehydrogenase4e-40166
NC_017186:2252438:2255591225559122568021212Amycolatopsis mediterranei S699 chromosome, complete genomeL-lactate dehydrogenase4e-40166
NC_007606:3755155:3775620377562037768101191Shigella dysenteriae Sd197, complete genomeL-lactate dehydrogenase3e-40166
NC_012759:3648500:3666176366617636673661191Escherichia coli BW2952 chromosome, complete genomeL-lactate dehydrogenase3e-40166
NC_004337:3590323:3752425375242537536151191Shigella flexneri 2a str. 301, complete genomeL-lactate dehydrogenase3e-40166
NC_005126:1265071:1271090127109012722381149Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein6e-40165
NC_010322:5293652:5293652529365252947971146Pseudomonas putida GB-1 chromosome, complete genomeL-lactate dehydrogenase5e-39162
NC_008027:775896:7964437964437975881146Pseudomonas entomophila L48, complete genomeL-lactate dehydrogenase, FMN linked4e-38159
NC_007963:1190847:1214439121443912156381200Chromohalobacter salexigens DSM 3043, complete genome(S)-2-hydroxy-acid oxidase6e-38158
NC_010501:734363:7661877661877673321146Pseudomonas putida W619, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase6e-38158
NC_006677:1255079:1276029127602912771741146Gluconobacter oxydans 621H, complete genomePutative oxidoreductase2e-37157
NC_007952:3196085:3228502322850232296861185Burkholderia xenovorans LB400 chromosome 2, complete sequenceS-mandelate dehydrogenase (MdlB)4e-37155
NC_010623:72500:8190181901831001200Burkholderia phymatum STM815 chromosome 2, complete sequenceL-lactate dehydrogenase (cytochrome)7e-37155
NC_008025:669281:6713996713996726701272Deinococcus geothermalis DSM 11300, complete genomeLactate 2-monooxygenase2e-36154
NC_007880:935670:9382129382129393811170Francisella tularensis subsp. holarctica, complete genomeL-lactate dehydrogenase4e-35149
NC_009257:963536:9773809773809785221143Francisella tularensis subsp. tularensis WY96-3418 chromosome,L-lactate dehydrogenase3e-34146
NC_009749:937412:9399549399549411231170Francisella tularensis subsp. holarctica FTA, complete genomeL-lactate dehydrogenase7e-34145
NC_013947:1570000:1585569158556915865971029Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase3e-32139
NC_020911:3410857:3428035342803534292191185Octadecabacter antarcticus 307, complete genomeL-lactate dehydrogenase LldD3e-32139
NC_014041:3197192:3206232320623232073831152Zunongwangia profunda SM-A87 chromosome, complete genomeL-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase7e-32138
NC_020911:3046916:3063151306315130642961146Octadecabacter antarcticus 307, complete genomecytochrome containing L-lactate dehydrogenase LldD2e-31136
NC_015703:3842144:3868489386848938696341146Runella slithyformis DSM 19594 chromosome, complete genomeL-lactate dehydrogenase (cytochrome)3e-31136
NC_013850:2182337:2182337218233721835211185Klebsiella variicola At-22 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase7e-31135
NC_003047:2477810:2483254248325424843481095Sinorhizobium meliloti 1021, complete genomePUTATIVE L-LACTATE DEHYDROGENASE (CYTOCHROME) PROTEIN5e-31135
NC_014323:245979:2489332489332501741242Herbaspirillum seropedicae SmR1 chromosome, complete genomeFMN-dependent L-lactate dehydrogenase4e-31135
NC_015590:2290359:2295803229580322968971095Sinorhizobium meliloti AK83 chromosome 1, complete sequence(S)-2-hydroxy-acid oxidase4e-31135
NC_017322:2191391:2196835219683521979291095Sinorhizobium meliloti BL225C chromosome, complete genome(S)-2-hydroxy-acid oxidase4e-31135
NC_017325:967598:9849539849539860471095Sinorhizobium meliloti SM11 chromosome, complete genome(S)-2-hydroxy-acid oxidase4e-31135
NC_008369:939356:942179942179943066888Francisella tularensis subsp. holarctica OSU18, complete genomeL-lactate dehydrogenase (cytochrome)1e-30134
NC_010676:2658495:2664906266490626661141209Burkholderia phytofirmans PsJN chromosome 2, complete sequenceL-lactate dehydrogenase (cytochrome)1e-29130
NC_014306:2518996:2535516253551625367571242Erwinia billingiae Eb661, complete genomeL-lactate dehydrogenase (Cytochrome)2e-26120
NC_007951:2233676:2234389223438922355791191Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative L-lactate dehydrogenase2e-22107
NC_015565:2027279:2078924207892420799431020Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete(S)-2-hydroxy-acid oxidase2e-20100
NC_015873:380485:4018204018204028541035Megasphaera elsdenii DSM 20460, complete genomedehydrogenase3e-2099.8
NC_014328:3747973:3754411375441137554271017Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative FMN-dependent alpha-hydroxy acid dehydrogenase3e-1996.7
NC_003366:2143173:2153614215361421546361023Clostridium perfringens str. 13, complete genomeprobable glycolate oxidase3e-1996.3
NC_013385:1064188:1086930108693010879491020Ammonifex degensii KC4, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase3e-1996.3
NC_015589:2878000:2894051289405128950731023Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase4e-1995.9
NC_018867:1357540:135754013575401358469930Dehalobacter sp. CF chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase6e-1995.5
NC_018866:1279000:127900012790001279929930Dehalobacter sp. DCA chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase6e-1995.5
NC_008262:2025699:2037558203755820385801023Clostridium perfringens SM101, complete genomehydroxyacid oxidase 23e-1893.6
NC_012563:3556763:3559159355915935601721014Clostridium botulinum A2 str. Kyoto, complete genomedehydrogenase, FMN-dependent3e-1893.2
NC_009698:3185359:3190124319012431911371014Clostridium botulinum A str. Hall chromosome, complete genomedehydrogenase, FMN-dependent3e-1893.2
NC_010516:3368951:3377658337765833786711014Clostridium botulinum B1 str. Okra, complete genomedehydrogenase, FMN-dependent3e-1893.2
NC_009495:3309550:3317028331702833180411014Clostridium botulinum A str. ATCC 3502 chromosome, complete genomedehydrogenase, FMN-dependent3e-1893.2
NC_009697:3291500:3293017329301732940301014Clostridium botulinum A str. ATCC 19397 chromosome, completedehydrogenase, FMN-dependent3e-1893.2
NC_012658:3387774:3395422339542233964351014Clostridium botulinum Ba4 str. 657 chromosome, complete genomedehydrogenase3e-1893.2
NC_013173:2261396:2269518226951822705341017Desulfomicrobium baculatum DSM 4028, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase6e-1892
NC_012225:2834642:2840533284053328415461014Brachyspira hyodysenteriae WA1, complete genomeFMN-dependent alpha-hydroxyacid oxidizing enzyme9e-1788.2
NC_014150:2617072:2623245262324526242581014Brachyspira murdochii DSM 12563 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase1e-1688.2
NC_018607:2375344:2394891239489123959041014Brachyspira pilosicoli B2904 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase1e-1687.8
NC_019908:1467000:1487172148717214881851014Brachyspira pilosicoli P43/6/78 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase1e-1687.8