Pre_GI: BLASTP Hits

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Query: NC_010102:1388344:1413934 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1413934, End: 1414509, Length: 576

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:1493849:151945415194541520029576Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-98357
NC_012125:2143246:216884921688492169424576Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-97355
NC_011149:1429523:149751214975121498087576Salmonella enterica subsp. enterica serovar Agona str. SL483,YceI family protein2e-97354
NC_011274:1544653:157026015702601570835576Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-97353
NC_011205:1633353:165898416589841659550567Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein7e-97352
NC_003198:1378457:139605413960541396629576Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-96350
NC_014394:1626699:162669916266991627265567Gallionella capsiferriformans ES-2 chromosome, complete genomeYceI family protein9e-23106
NC_010943:493002:493679493679494386708Stenotrophomonas maltophilia K279a, complete genomehypothetical protein7e-1993.6
NC_016147:513819:518531518531519109579Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein3e-1684.7
NC_020126:2262049:227989422798942280508615Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-1478.2
NC_011283:2185462:219002221900222190600579Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-1375.1
NC_013850:2103469:212356621235662124144579Klebsiella variicola At-22 chromosome, complete genomeYceI family protein4e-1374.3
NC_014666:1117000:113109111310911131684594Frankia sp. EuI1c chromosome, complete genomeYceI family protein5e-1373.9
NC_015683:947048:954727954727955254528Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein5e-1373.9
NC_017030:6558624:656266065626606563205546Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein1e-1273.2
NC_017317:944218:951897951897952424528Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein1e-1272.8
NC_007435:1825741:184537918453791845936558Burkholderia pseudomallei 1710b chromosome II, complete sequenceYceI-like family protein2e-1271.6
NC_010571:2943369:294689029468902947459570Opitutus terrae PB90-1, complete genomeYceI family protein3e-1271.2
NC_006349:2311817:744074408093654Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceYceI like family protein5e-1270.9
NC_008784:1151305:117163111716311172284654Burkholderia mallei SAVP1 chromosome I, complete sequenceputative lipoprotein5e-1270.9
NC_011881:89705:106644106644107216573Arthrobacter chlorophenolicus A6 plasmid pACHL02, completeYceI family protein5e-1270.9
NC_009075:3113393:640064007053654Burkholderia pseudomallei 668 chromosome II, complete sequenceYceI like family protein5e-1270.9
NC_008835:1483237:150275515027551503354600Burkholderia mallei NCTC 10229 chromosome I, complete sequenceYceI like family protein5e-1270.9
NC_009079:2339756:744074408039600Burkholderia mallei NCTC 10247 chromosome I, complete sequenceputative lipoprotein5e-1270.9
NC_019940:1727384:174953617495361750120585Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein8e-1270.1
NC_015942:447308:460992460992461636645Acidithiobacillus ferrivorans SS3 chromosome, complete genomeYceI family protein8e-1270.1
NC_009078:3087759:631963196972654Burkholderia pseudomallei 1106a chromosome II, complete sequenceputative lipoprotein9e-1270.1
NC_006351:3159630:630063006953654Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein9e-1270.1
NC_014830:3387479:339104733910473391658612Intrasporangium calvum DSM 43043 chromosome, complete genomeYceI family protein9e-1270.1
NC_007650:2901751:810381038753651Burkholderia thailandensis E264 chromosome II, complete sequenceYceI like family protein1e-1169.7
NC_009707:1338742:135840613584061358978573Campylobacter jejuni subsp. doylei 269.97 chromosome, completehypothetical protein2e-1168.9
NC_017305:863072:873016873016873543528Corynebacterium pseudotuberculosis PAT10 chromosome, completeMetabolite transport protein yceI2e-1168.6
NC_007404:2048000:205409820540982054688591Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein3e-1168.6
NC_016932:832748:861306861306861833528Corynebacterium pseudotuberculosis 316 chromosome, complete genomemetabolite transport protein yceI3e-1168.6
NC_014329:844622:873193873193873720528Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein2e-1168.6
NC_016781:844613:873184873184873711528Corynebacterium pseudotuberculosis 3/99-5 chromosome, completemetabolite transport protein yceI2e-1168.6
NC_017031:863093:873037873037873564528Corynebacterium pseudotuberculosis P54B96 chromosome, completeMetabolite transport protein yceI2e-1168.6
NC_017300:863898:873089873089873616528Corynebacterium pseudotuberculosis 1002 chromosome, completeMetabolite transport protein yceI2e-1168.6
NC_017301:863500:872811872811873338528Corynebacterium pseudotuberculosis C231 chromosome, completeMetabolite transport protein yceI2e-1168.6
NC_017303:863060:873004873004873531528Corynebacterium pseudotuberculosis I19 chromosome, complete genomeMetabolite transport protein yceI2e-1168.6
NC_010175:2488000:250502025050202505568549Chloroflexus aurantiacus J-10-fl, complete genomeYceI family protein3e-1168.2
NC_014623:9492000:950002295000229500573552Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeYceI-like family protein8e-1166.6
NC_014623:1273025:128503512850351285616582Stigmatella aurantiaca DW4/3-1 chromosome, complete genomelipid/polyisoprenoid-binding, ycei-like family protein1e-1066.2
NC_013124:1784117:180645418064541807005552Acidimicrobium ferrooxidans DSM 10331, complete genomeYceI family protein2e-1065.5
NC_013037:5587802:558998855899885590515528Dyadobacter fermentans DSM 18053, complete genomeYceI family protein3e-1065.1
NC_020210:2044944:204768220476822048209528Geobacillus sp. GHH01, complete genomelipid/polyisoprenoid-binding protein3e-1064.7
NC_015968:1709680:173164117316411732219579Enterobacter asburiae LF7a chromosome, complete genomeProtein yceI9e-1063.2
NC_012121:1894148:190936619093661909881516Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein2e-0962
NC_016906:4562874:458196045819604582511552Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative YceI-like lipid/polyisoprenoid-binding protein4e-0961.2
NC_013956:1762171:180020818002081800783576Pantoea ananatis LMG 20103 chromosome, complete genomeYceI5e-0960.8
NC_013595:151500:176941176941177513573Streptosporangium roseum DSM 43021, complete genomehypothetical protein7e-0960.5
NC_015064:2421034:245810524581052458764660Acidobacterium sp. MP5ACTX9 chromosome, complete genomeYceI family protein3e-0858.2
NC_012912:1788308:183527618352761835854579Dickeya zeae Ech1591, complete genomeYceI family protein3e-0858.2
NC_014306:1810548:182672418267241827299576Erwinia billingiae Eb661, complete genomeProtein YceI4e-0857.8
NC_002953:2773000:277303127730312773546516Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein4e-0857.8
NC_016612:5231065:525829552582955258765471Klebsiella oxytoca KCTC 1686 chromosome, complete genomeYceI protein5e-0857.4
NC_016582:4934854:495210149521014952640540Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein8e-0856.6
NC_020209:4312892:435492943549294355507579Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-0756.2
NC_007168:665284:666972666972667487516Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-0755.8
NC_013739:5705325:573513157351315735688558Conexibacter woesei DSM 14684, complete genomeYceI family protein2e-0652
NC_020211:2012480:201890320189032019481579Serratia marcescens WW4, complete genomesecreted protein3e-0651.6