Pre_GI: BLASTP Hits

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Query: NC_010102:1388344:1408963 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1408963, End: 1410306, Length: 1344

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:1761352:1761352176135217626951344Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein0919
NC_011094:1683979:1683979168397916853221344Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein0918
NC_011080:1709612:1709612170961217109551344Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein0918
NC_011205:1633353:1654004165400416553471344Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein0917
NC_017046:1669995:1669995166999516713891395Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0916
NC_006905:1726416:1726416172641617277591344Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein0916
NC_011294:1493849:1514483151448315158261344Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0916
NC_016831:1468691:1468691146869114700341344Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein0916
NC_003197:1713259:1713259171325917146021344Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein0916
NC_016810:1670112:1670112167011216714551344Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0916
NC_016857:1670112:1670112167011216714551344Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein0916
NC_016860:1710950:1710950171095017122931344Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein0916
NC_016863:1671428:1671428167142816727711344Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein0916
NC_016856:1723236:1723236172323617245791344Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein0915
NC_012125:2143246:2163827216382721652211395Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein0915
NC_011274:1544653:1565289156528915666321344Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0914
NC_011149:1429523:1492541149254114938841344Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein0914
NC_010067:1300606:1316977131697713183711395Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0874
NC_004631:1587000:1588755158875515898551101Salmonella enterica subsp. enterica serovar Typhi Ty2, complete0753
NC_003198:1378457:1391326139132613924261101Salmonella enterica subsp. enterica serovar Typhi str. CT18,0753
NC_016832:1582273:1585705158570515867331029Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0702