Pre_GI: BLASTP Hits

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Query: NC_010102:1388344:1400581 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1400581, End: 1400925, Length: 345

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1671428:168080916808091681153345Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein1e-52204
NC_011083:1761352:177074217707421771086345Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cyanate transport1e-52204
NC_003197:1713259:172264017226401722984345Salmonella typhimurium LT2, complete genomeputative inner membrane protein1e-52204
NC_006905:1726416:173579917357991736143345Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein1e-52204
NC_011274:1544653:155690715569071557251345Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-52204
NC_011294:1493849:150610115061011506445345Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-52204
NC_012125:2143246:215549721554972155841345Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-52204
NC_016810:1670112:167949316794931679837345Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-52204
NC_016831:1468691:147807214780721478416345Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-52204
NC_016856:1723236:173261717326171732961345Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein1e-52204
NC_016857:1670112:167949316794931679837345Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein1e-52204
NC_016860:1710950:172033117203311720675345Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-52204
NC_011205:1633353:164562316456231645967345Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cyanate transport3e-51200
NC_011080:1709612:171899317189931719337345Salmonella enterica subsp. enterica serovar Newport str. SL254,cyanate transport6e-51199
NC_011094:1683979:169336116933611693705345Salmonella enterica subsp. enterica serovar Schwarzengrund strcyanate transport1e-50197
NC_011149:1429523:148417114841711484515345Salmonella enterica subsp. enterica serovar Agona str. SL483,cyanate transport2e-50197
NC_003198:1378457:139072013907201391064345Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-50195
NC_004631:1587000:159011715901171590461345Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-50195
NC_015761:1599000:160651516065151606871357Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-41167
NC_016514:2476359:248382424838242484309486Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein7e-41165
NC_014618:4114004:411851541185154118850336Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein3e-38157
NC_017046:1669995:167937616793761679642267Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein7e-37152
NC_016832:1582273:158706715870671587333267Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-36148
NC_015663:2090442:211662721166272116971345Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-34143
NC_014121:1848971:186048418604841860816333Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative inner membrane protein2e-33140
NC_020063:1051310:105792710579271058268342Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein3e-26117
NC_006138:2341975:234197523419752342589615Desulfotalea psychrophila LSv54, complete genomehypothetical protein7e-1269.3
NC_012108:3824977:383872138387213839374654Desulfobacterium autotrophicum HRM2, complete genomeputative cold-shock protein8e-1269.3
NC_012997:4152938:417130041713004171755456Teredinibacter turnerae T7901, complete genomecold-shock DNA-binding domain protein4e-1166.6
NC_018691:318662:333336333336333716381Alcanivorax dieselolei B5 chromosome, complete genomeCold-shock DNA-binding domain protein1e-1065.5
NC_012691:779826:779826779826780101276Tolumonas auensis DSM 9187, complete genomeprotein of unknown function DUF12943e-1063.9
NC_015856:1733500:175381917538191754436618Collimonas fungivorans Ter331 chromosome, complete genomecold-shock DNA-binding domain-containing protein6e-1062.8
NC_009654:1729159:174035317403531740628276Marinomonas sp. MWYL1, complete genomehypothetical protein1e-0962
NC_012778:1946924:196326519632651963534270Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-0858.2