Pre_GI: BLASTP Hits

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Query: NC_010102:1137247:1160591 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1160591, End: 1160695, Length: 105

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1897611:191707019170701917198129Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1271.2
NC_011083:1993672:200681020068102006938129Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1271.2
NC_011205:1391971:140861614086161408744129Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-1269.3
NC_011094:1923870:193586319358631935991129Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-1168.2
NC_016831:1690811:170392617039261704054129Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1063.5