Pre_GI: BLASTP Hits

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Query: NC_010079:575123:580182 Staphylococcus aureus subsp. aureus USA300_TCH1516, complete

Start: 580182, End: 580706, Length: 525

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017351:566717:571776571776572300525Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeyacP-like NYN domain protein7e-99358
NC_002951:596000:601073601073601597525Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein7e-99358
NC_002953:561740:562898562898563422525Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein7e-99358
NC_003923:559208:564267564267564791525Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein7e-99358
NC_007622:537195:542255542255542779525Staphylococcus aureus RF122, complete genomehypothetical protein7e-99358
NC_007795:511186:516245516245516769525Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein7e-99358
NC_007793:574580:579639579639580163525Staphylococcus aureus subsp. aureus USA300, complete genomehypothetical protein7e-99358
NC_009641:565103:570162570162570686525Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein7e-99358
NC_016912:511182:516241516241516765525Staphylococcus aureus subsp. aureus VC40 chromosome, completehypothetical protein7e-99358
NC_016928:561138:563689563689564213525Staphylococcus aureus subsp. aureus M013 chromosome, completehypothetical protein7e-99358
NC_017337:580850:585909585909586433525Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein7e-99358
NC_017341:591952:593110593110593634525Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,hypothetical protein7e-99358
NC_017347:586629:589180589180589704525Staphylococcus aureus subsp. aureus T0131 chromosome, completehypothetical protein7e-99358
NC_002745:572959:573705573705574229525Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein3e-98357
NC_009782:596847:599398599398599922525Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein3e-98357
NC_002758:592892:597951597951598475525Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein3e-98357
NC_009487:609170:614229614229614753525Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein3e-98357
NC_009632:609046:614105614105614629525Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein3e-98357
NC_002952:582365:584916584916585440525Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein2e-98357
NC_017342:2758157:277871627787162779240525Staphylococcus aureus subsp. aureus TCH60 chromosome, completehypothetical protein2e-98357
NC_017338:556319:557477557477558001525Staphylococcus aureus subsp. aureus JKD6159 chromosome, completehypothetical protein7e-98355
NC_016941:549373:552555552555553079525Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein8e-98355
NC_020164:2219612:224402422440242244551528Staphylococcus warneri SG1, complete genomehypothetical protein5e-90329
NC_002976:177282:179827179827180354528Staphylococcus epidermidis RP62A, complete genomehypothetical protein3e-85313
NC_004461:277291:295575295575296102528Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein3e-85313
NC_013893:2406893:242494724249472425474528Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeHypothetical protein DUF901, C-terminal domain of ribosome protection-type Tc-resistance proteins1e-82305
NC_012121:198480:199233199233199757525Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein2e-66251
NC_010382:4479464:448298344829834483495513Lysinibacillus sphaericus C3-41, complete genomehypothetical protein3e-28124
NC_004193:119737:122295122295122804510Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-28124
NC_014171:109280:109280109280109792513Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein3e-25114
NC_017208:108134:111331111331111843513Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeputative cytoplasmic protein1e-24112
NC_014220:2265882:227876822787682279283516Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeprotein of unknown function DUF9015e-23107
NC_009633:4563877:459714545971454597654510Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein3e-23107
NC_010718:193231:198860198860199372513Natranaerobius thermophilus JW/NM-WN-LF, complete genomeprotein of unknown function DUF9013e-23107
NC_014393:4482896:452126545212654521774510Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein8e-23106
NC_012470:258287:261831261831262349519Streptococcus equi subsp. zooepidemicus, complete genomehypothetical protein2e-22105
NC_015425:198315:220995220995221504510Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein6e-22103
NC_012563:3956500:399402139940213994530510Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein6e-22103
NC_010516:3759136:379709237970923797601510Clostridium botulinum B1 str. Okra, complete genomehypothetical protein6e-22103
NC_009698:3553365:359919335991933599702510Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein7e-22103
NC_009495:3688138:372609537260953726604510Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein7e-22103
NC_015555:327562:334667334667335161495Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeprotein of unknown function DUF9019e-22102
NC_010520:3788702:382669338266933827202510Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein6e-21100
NC_008593:196257:216323216323216829507Clostridium novyi NT, complete genomehypothetical protein1e-2099.4
NC_019970:336472:364354364354364848495Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative RNA-binding protein containing a PIN domain5e-2097.1
NC_014410:403776:410852410852411346495Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,protein of unknown function DUF9015e-2097.1
NC_013316:81969:861638616386690528Clostridium difficile R20291, complete genomehypothetical protein7e-2096.7
NC_010424:214640:218622218622219128507Candidatus Desulforudis audaxviator MP104C, complete genomeprotein of unknown function DUF9012e-1995.1
NC_014392:1935130:195110319511031951609507Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomehypothetical protein4e-1994
NC_015958:2251619:231292123129212313427507Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehypothetical protein8e-1993.2
NC_009617:163466:173123173123173635513Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein9e-1992.8
NC_014652:757381:775227775227775733507Caldicellulosiruptor hydrothermalis 108 chromosome, completehypothetical protein1e-1892.4
NC_017295:3250451:328811332881133288631519Clostridium acetobutylicum EA 2018 chromosome, complete genomehypothetical protein1e-1892.4
NC_003030:3251941:328885632888563289374519Clostridium acetobutylicum ATCC 824, complete genomeUncharacterized conserved protein, YACP B.subtilis ortholog1e-1892.4
NC_015687:3252233:329048332904833291001519Clostridium acetobutylicum DSM 1731 chromosome, complete genomehypothetical protein1e-1892.4
NC_020291:166500:174662174662175174513Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative RNA-binding protein1e-1892.4
NC_008262:2598920:263767226376722638181510Clostridium perfringens SM101, complete genomehypothetical protein1e-1892.4
NC_014964:388458:395761395761396267507Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein2e-1891.7
NC_010723:223935:232334232334232846513Clostridium botulinum E3 str. Alaska E43, complete genometetracycline resistance protein5e-1890.5
NC_010674:222016:230402230402230914513Clostridium botulinum B str. Eklund 17B, complete genometetracycline resistance protein6e-1890.1
NC_010321:393000:400357400357400851495Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein1e-1789.4
NC_010320:881351:886288886288886782495Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein1e-1789.4
NC_021182:4557608:459511145951114595623513Clostridium pasteurianum BC1, complete genomeputative RNA-binding protein containing a PIN domain2e-1789
NC_014833:3268102:3268102326810232706782577Ruminococcus albus 7 chromosome, complete genomesmall GTP-binding protein6e-1787
NC_015913:1491393:152089915208991521414516Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein2e-1065.1
NC_017294:1457262:148728914872891487840552Candidatus Arthromitus sp. SFB-mouse-Yit, complete genometetracycline resistance protein2e-1065.1
NC_015671:1540860:1560118156011815614851368Cellvibrio gilvus ATCC 13127 chromosome, complete genomehypothetical protein9e-0959.7