Pre_GI: BLASTP Hits

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Query: NC_010079:458940:458940 Staphylococcus aureus subsp. aureus USA300_TCH1516, complete

Start: 458940, End: 460151, Length: 1212

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017347:469024:4690244690244702351212Staphylococcus aureus subsp. aureus T0131 chromosome, completeRestriction modification system DNA specificity domain protein0761
NC_002745:450000:4525494525494537601212Staphylococcus aureus subsp. aureus N315, complete genomeprobable restriction modification system specificity subunit0761
NC_002758:475516:4770654770654782761212Staphylococcus aureus subsp. aureus Mu50, complete genomeprobable restriction modification system specificity subunit0761
NC_009487:486000:4878104878104890211212Staphylococcus aureus subsp. aureus JH9 chromosome, completerestriction modification system DNA specificity subunit0761
NC_009632:486331:4878804878804890911212Staphylococcus aureus subsp. aureus JH1 chromosome, completerestriction modification system DNA specificity subunit0761
NC_009641:448640:4486404486404498511212Staphylococcus aureus subsp. aureus str. Newman chromosome,type I restriction modification system, site specificity determination subunit0761
NC_013450:412122:4136714136714148821212Staphylococcus aureus subsp. aureus ED98, complete genometype I restriction-modification system S subunit0761
NC_017341:472685:4726854726854738961212Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,restriction endonuclease S subunit0761
NC_017343:416834:4168344168344180451212Staphylococcus aureus subsp. aureus ECT-R 2, complete genometype I restriction modification DNA specificity domain protein0761
NC_007793:459045:4590454590454602561212Staphylococcus aureus subsp. aureus USA300, complete genomeputative restriction/modification system specificity protein0761
NC_020054:4161049:4178338417833841795761239Fibrella aestuarina BUZ 2 drat genometype I restriction enzyme, S subunit1e-64247
NC_016584:1998000:2044072204407220453071236Desulfosporosinus orientis DSM 765 chromosome, complete genomerestriction endonuclease S subunit3e-55216
NC_014328:303063:3449343449343461871254Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, specificity subunit9e-49194
NC_019904:5308998:5313727531372753149651239Echinicola vietnamensis DSM 17526 chromosome, complete genomerestriction endonuclease S subunit3e-46186
NC_010816:2326453:2338749233874923399901242Bifidobacterium longum DJO10A, complete genomeRestriction endonuclease S subunit3e-43176
NC_017338:436711:4382604382604394951236Staphylococcus aureus subsp. aureus JKD6159 chromosome, completetype I restriction modification system, site specificity determination subunit, HsdS_11e-32140
NC_016023:267581:2798362798362811191284Bacillus coagulans 36D1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-31137
NC_007508:570000:5767025767025779611260Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (specificity subunit)8e-30131
NC_015737:831792:8542308542308554021173Clostridium sp. SY8519, complete genomehypothetical protein9e-30131
NC_010545:1475410:1490965149096514922001236Corynebacterium urealyticum DSM 7109, complete genometype I restriction-modification system, specificity subunit6e-29128
NC_010682:460523:4806054806054819121308Ralstonia pickettii 12J chromosome 1, complete sequencerestriction modification system DNA specificity domain8e-27121
NC_006513:1547092:1555046155504615563201275Azoarcus sp. EbN1, complete genomerestriction modification system specificity subunit2e-24113
NC_008571:744500:7506847506847519401257Gramella forsetii KT0803, complete genometype I restriction-modification system DNA speci ficity subunit1e-23111
NC_020164:89214:1079251079251090911167Staphylococcus warneri SG1, complete genometype I restriction modification subunit5e-22105
NC_016803:2431672:2450504245050424517211218Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-21104
NC_006270:741731:7518027518027529951194Bacillus licheniformis ATCC 14580, complete genomeHsdIB1e-21104
NC_006322:741516:7515867515867527791194Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-21104
NC_014638:1333976:1345578134557813468191242Bifidobacterium bifidum PRL2010 chromosome, complete genomerestriction endonuclease S subunit2e-21103
NC_018604:2579000:2603755260375526049511197Brachyspira pilosicoli WesB complete genometype I restriction-modification enzyme S subunit1e-20101
NC_010571:1334000:1344968134496813462811314Opitutus terrae PB90-1, complete genomerestriction modification system DNA specificity domain2e-20100
NC_014632:1112733:1145320114532011466211302Ilyobacter polytropus DSM 2926 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-2098.2
NC_014616:1296287:1306098130609813073361239Bifidobacterium bifidum S17 chromosome, complete genomeHsdS-like protein of Type I restriction-modification system1e-1998.2
NC_013037:6281164:6322095632209563233631269Dyadobacter fermentans DSM 18053, complete genomerestriction modification system DNA specificity domain2e-1997.1
NC_017068:1143515:1184538118453811857701233Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction enzyme, specificity subunit2e-1997.1
NC_016026:1224129:1234454123445412357431290Micavibrio aeruginosavorus ARL-13 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein5e-1995.9
NC_003902:555699:5640055640055652971293Xanthomonas campestris pv. campestris str. ATCC 33913, completeputative restriction modification system specificity subunit7e-1892
NC_007086:557789:5660955660955673871293Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction modification system specificity subunit7e-1892
NC_020450:875757:8959428959428971441203Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme, S subunit5e-1685.9
NC_008942:815280:8215758215758229151341Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-1584.3
NC_014727:995480:1006396100639610075681173Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type-i specificity determinant subunit4e-1582.8
NC_013170:311045:352409352409353035627Cryptobacterium curtum DSM 15641, complete genomehypothetical protein4e-1479.7
NC_009634:299327:3072993072993085221224Methanococcus vannielii SB chromosome, complete genomerestriction modification system DNA specificity subunit5e-1479.3
NC_002516:3079850:3094757309475730960521296Pseudomonas aeruginosa PAO1, complete genomehypothetical protein9e-1478.6
NC_014618:690056:7105557105557117391185Enterobacter cloacae SCF1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein9e-1478.6
NC_006672:47610:6642766427676351209Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceType I restriction-modification enzyme S subunit5e-1375.9
NC_014973:3452100:3487751348775134891301380Geobacter sp. M18 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-1375.1
NC_003901:3591500:3598245359824535996271383Methanosarcina mazei Go1, complete genometype I restriction-modification system specificity subunit8e-1375.1
NC_013446:1724000:1729654172965417309431290Comamonas testosteroni CNB-2, complete genomehypothetical protein1e-1274.7
NC_007404:2743877:2758249275824927594511203Thiobacillus denitrificans ATCC 25259, complete genomeputative restriction endonuclease S subunit1e-1274.7
NC_007644:1694879:1707326170732617086541329Moorella thermoacetica ATCC 39073, complete genomeRestriction modification system DNA specificity domain3e-1273.6
NC_014219:192555:2130542130542142891236Bacillus selenitireducens MLS10 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-1273.6
NC_008255:3331613:3360658336065833619561299Cytophaga hutchinsonii ATCC 33406, complete genomeprobable type I restriction-modification system4e-1272.8
NC_016782:1076619:1083560108356010847531194Corynebacterium diphtheriae 241 chromosome, complete genometype I restriction enzyme, S subunit5e-1272.4
NC_016786:1079000:1083532108353210847251194Corynebacterium diphtheriae HC01 chromosome, complete genometype I restriction enzyme, S subunit5e-1272.4
NC_014217:2760898:2772811277281127739891179Starkeya novella DSM 506 chromosome, complete genomerestriction modification system DNA specificity domain protein8e-1271.6
NC_010831:788500:7976347976347989441311Chlorobium phaeobacteroides BS1, complete genomeputative type I restriction-modification system9e-1271.6
NC_020829:1:1056710567119461380Pseudomonas denitrificans ATCC 13867, complete genomeputative type I restriction enzyme, S subunit2e-1170.5
NC_018607:1505908:1518405151840515196521248Brachyspira pilosicoli B2904 chromosome, complete genometype I restriction-modification enzyme S subunit2e-1170.5
NC_014008:1463795:1483479148347914848221344Coraliomargarita akajimensis DSM 45221 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-1170.1
NC_015164:493159:5474975474975487861290Bacteroides salanitronis DSM 18170 chromosome, complete genomerestriction modification system DNA specificity domain8e-1168.6
NC_015634:2595500:2612515261251526136931179Bacillus coagulans 2-6 chromosome, complete genomehypothetical protein2e-1067.4
NC_014506:157396:1630731630731644011329Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeRestriction endonuclease S subunit3e-1067
NC_003919:3396136:3402660340266034039401281Xanthomonas axonopodis pv. citri str. 306, complete genometype I restriction-modification system specificity determinant3e-1066.6
NC_011666:1661491:1673298167329816746171320Methylocella silvestris BL2, complete genometype I restriction enzyme2e-0963.9
NC_018720:2138180:2150752215075221521011350Bifidobacterium asteroides PRL2011 chromosome, complete genometype I restriction-modification system2e-0963.9
NC_013203:202008:2370032370032381631161Atopobium parvulum DSM 20469, complete genomerestriction modification system DNA specificity domain protein3e-0963.5
NC_013204:929434:9634259634259658242400Eggerthella lenta DSM 2243, complete genomeN-6 DNA methylase3e-0963.2
NC_008322:2077628:2102612210261221039581347Shewanella sp. MR-7, complete genomerestriction modification system DNA specificity domain9e-0961.6
NC_006270:4149004:4166525416652541676881164Bacillus licheniformis ATCC 14580, complete genomeHsdS2e-0860.8
NC_006322:4149500:4166640416664041678031164Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-0860.8
NC_016944:1937645:1958591195859119599191329Vibrio cholerae IEC224 chromosome I, complete sequencetype I restriction enzyme, S subunit4e-0859.7
NC_016445:1363831:1383683138368313850231341Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetype I restriction enzyme, S subunit5e-0859.3
NC_002505:1892430:1912283191228319136711389Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein4e-0859.3
NC_009457:1444449:1465386146538614667741389Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein4e-0859.3
NC_012578:1838470:1859416185941618608041389Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein4e-0859.3
NC_012582:1976962:1996805199680519981931389Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein4e-0859.3
NC_014727:995480:1008566100856610097111146Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,restriction endonuclease s subunits-like protein2e-0757.4
NC_015703:4483500:4499204449920445014052202Runella slithyformis DSM 19594 chromosome, complete genometype I restriction-modification system, M subunit2e-0757
NC_014562:3985500:3997879399787939990151137Pantoea vagans C9-1 chromosome, complete genometype I restriction-modification system specificty subunit3e-0756.6
NC_015663:2090442:2112256211225621135961341Enterobacter aerogenes KCTC 2190 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-0755.8
NC_016023:1959255:1968791196879119699301140Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein7e-0755.5
NC_016803:1646342:1659768165976816613661599Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-0755.5
NC_015422:2126614:2142598214259821440221425Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein1e-0654.7
NC_017187:814940:8241198241198254171299Arcobacter butzleri ED-1, complete genomerestriction-modification system DNA specificity subunit1e-0654.7
NC_008787:685401:7055047055047067721269Campylobacter jejuni subsp. jejuni 81-176, complete genometype I restriction modification DNA specificity domain protein2e-0653.9
NC_006448:1451729:147383914738391474144306Streptococcus thermophilus LMG 18311, complete genometype I restriction-modification system specificty subunit, truncated8e-0652