Pre_GI: BLASTP Hits

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Query: NC_010079:2102856:2121169 Staphylococcus aureus subsp. aureus USA300_TCH1516, complete

Start: 2121169, End: 2121330, Length: 162

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017338:1517723:155385215538521554013162Staphylococcus aureus subsp. aureus JKD6159 chromosome, completehypothetical protein5e-22102
NC_002951:351029:361971361971362132162Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein4e-2199.8
NC_009632:921759:926665926665926826162Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein2e-2097.4
NC_009487:921884:926790926790926951162Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein2e-2097.4
NC_009632:2148767:216399121639912164152162Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein3e-2097.4
NC_009487:2148316:216411721641172164278162Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein3e-2097.4
NC_007795:1922000:196065619606561960817162Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephi PVL orf 38-like protein-related protein5e-2096.3
NC_009487:362475:366835366835366996162Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein5e-2096.3
NC_009632:361229:366905366905367066162Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein5e-2096.3
NC_017338:2034698:207284520728452073006162Staphylococcus aureus subsp. aureus JKD6159 chromosome, completehypothetical protein5e-2096.3
NC_017351:643674:648690648690648851162Staphylococcus aureus subsp. aureus 11819-97 chromosome, completehypothetical protein5e-2096.3
NC_017337:1107930:111396811139681114135168Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein1e-1995.1
NC_007622:1842000:188114118811411881311171Staphylococcus aureus RF122, complete genomehypothetical protein2e-1994.4
NC_002758:2101137:211901921190192119180162Staphylococcus aureus subsp. aureus Mu50, complete genomephi PVL ORF 38 homolog8e-1785.5
NC_007793:1574456:15865101586510158660596Staphylococcus aureus subsp. aureus USA300, complete genomephiSLT ORF53-like protein6e-1062.8