Pre_GI: BLASTP Hits

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Query: NC_010079:2102856:2116670 Staphylococcus aureus subsp. aureus USA300_TCH1516, complete

Start: 2116670, End: 2117155, Length: 486

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017351:2074000:210237521023752102860486Staphylococcus aureus subsp. aureus 11819-97 chromosome, completebeta-lactamase superfamily domain protein2e-91333
NC_017341:2127815:214684821468482147333486Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,hypothetical protein2e-91333
NC_002758:2101137:211451821145182115003486Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein2e-91333
NC_017351:643674:652565652565653050486Staphylococcus aureus subsp. aureus 11819-97 chromosome, completebeta-lactamase superfamily domain protein7e-91332
NC_009632:361229:371087371087371572486Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein6e-90328
NC_009632:2148767:215948521594852159970486Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein6e-90328
NC_009487:362475:370807370807371502696Staphylococcus aureus subsp. aureus JH9 chromosome, complete8e-90328
NC_009487:2148316:215961121596112160306696Staphylococcus aureus subsp. aureus JH9 chromosome, complete8e-90328
NC_017338:2034698:206864820686482069133486Staphylococcus aureus subsp. aureus JKD6159 chromosome, completehypothetical protein1e-89327
NC_009633:2592000:262636026263602627100741Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein2e-39160
NC_003212:1248000:125475812547581255516759Listeria innocua Clip11262, complete genomehypothetical protein3e-34144
NC_021182:2536000:254317125431712543911741Clostridium pasteurianum BC1, complete genomemetal-dependent hydrolase, beta-lactamase superfamily I6e-32136
NC_018515:4660808:468851146885114689254744Desulfosporosinus meridiei DSM 13257 chromosome, complete genomebeta-lactamase superfamily metal-dependent hydrolase9e-30129
NC_008571:2582674:259551425955142596251738Gramella forsetii KT0803, complete genomemetallo-beta-lactamase domain protein5e-22103
NC_009617:1897887:190677519067751907482708Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebeta-lactamase domain-containing protein4e-1994
NC_010674:2856997:286536328653632866073711Clostridium botulinum B str. Eklund 17B, complete genomemetallo-beta-lactamase domain protein6e-1993.2