Pre_GI: BLASTP Hits

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Query: NC_010079:15441:33712 Staphylococcus aureus subsp. aureus USA300_TCH1516, complete

Start: 33712, End: 34191, Length: 480

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017347:16000:335773357734056480Staphylococcus aureus subsp. aureus T0131 chromosome, completeribosomal RNA large subunit methyltransferase H3e-89326
NC_002745:16000:336923369234171480Staphylococcus aureus subsp. aureus N315, complete genomeconserved hypothetical protein orfX3e-89326
NC_007795:15414:336913369134170480Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein3e-89326
NC_007793:15441:337123371234191480Staphylococcus aureus subsp. aureus USA300, complete genomeconserved hypothetical protein OrfX3e-89326
NC_002952:15405:336603366034139480Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein3e-89326
NC_007622:16000:339183391834397480Staphylococcus aureus RF122, complete genomehypothetical protein3e-89326
NC_009782:16000:336933369334172480Staphylococcus aureus subsp. aureus Mu3, complete genomeconserved hypothetical protein orfX3e-89326
NC_009487:16169:337473374734226480Staphylococcus aureus subsp. aureus JH9 chromosome, completerRNA large subunit methyltransferase3e-89326
NC_009632:16238:338163381634295480Staphylococcus aureus subsp. aureus JH1 chromosome, completerRNA large subunit methyltransferase3e-89326
NC_016928:16869:344293442934908480Staphylococcus aureus subsp. aureus M013 chromosome, completeLSU m3Psi1915 methyltransferase RlmH ybeA3e-89326
NC_016941:14658:336133361334092480Staphylococcus aureus subsp. aureus MSHR1132, complete genomeribosomal RNA large subunit methyltransferase H3e-89326
NC_017341:14970:331453314533624480Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,rRNA large subunit methyltransferase3e-89326
NC_017342:483359:486297486297486776480Staphylococcus aureus subsp. aureus TCH60 chromosome, completealpha/beta knot family protein3e-89326
NC_017343:16000:336923369234171480Staphylococcus aureus subsp. aureus ECT-R 2, complete genomehypothetical protein3e-89326
NC_017351:15413:336683366834147480Staphylococcus aureus subsp. aureus 11819-97 chromosome, completerRNA large subunit m3Psi methyltransferase RlmH8e-89325
NC_016912:15414:336913369134170480Staphylococcus aureus subsp. aureus VC40 chromosome, completerRNA large subunit methyltransferase1e-88324
NC_002953:15416:336893368934168480Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein2e-88323
NC_003923:15416:336893368934168480Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-88323
NC_017338:14886:331443314433623480Staphylococcus aureus subsp. aureus JKD6159 chromosome, completerRNA large subunit methyltransferase2e-88323
NC_007168:16431:293022930229781480Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein8e-83305
NC_004461:1:320313203132510480Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein1e-82305
NC_002976:2580485:258417625841762584655480Staphylococcus epidermidis RP62A, complete genomehypothetical protein1e-82305
NC_020410:3801583:381590638159063816385480Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRibosomal RNA large subunit methyltransferase H1e-52205
NC_020272:84227:924649246492943480Bacillus amyloliquefaciens IT-45, complete genomerRNA large subunit methyltransferase8e-53205
NC_009725:3809403:382510038251003825579480Bacillus amyloliquefaciens FZB42, complete genomeYydA8e-53205
NC_006322:4149500:417567341756734176152480Bacillus licheniformis ATCC 14580, complete genomehypothetical protein7e-53205
NC_006270:4149004:417555841755584176037480Bacillus licheniformis ATCC 14580, complete genomehypothetical protein7e-53205
NC_019842:3852062:386748138674813867960480Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,rRNA large subunit methyltransferase7e-53205
NC_017188:3839478:385322238532223853701480Bacillus amyloliquefaciens TA208 chromosome, complete genomerRNA large subunit methyltransferase7e-53205
NC_017190:3879148:391279339127933913272480Bacillus amyloliquefaciens LL3 chromosome, complete genomeribosomal RNA large subunit methyltransferase H7e-53205
NC_017191:3841170:385491438549143855393480Bacillus amyloliquefaciens XH7 chromosome, complete genomerRNA large subunit methyltransferase7e-53205
NC_016047:4108910:413040641304064130885480Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein2e-52204
NC_009848:3631243:364258936425893643068480Bacillus pumilus SAFR-032, complete genomeSPOUT methyltransferase superfamily protein3e-52203
NC_019896:76094:813268132681805480Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein7e-52202
NC_020244:3961337:397899239789923979471480Bacillus subtilis XF-1, complete genomerRNA large subunit methyltransferase6e-52202
NC_014976:2117567:213210521321052132584480Bacillus subtilis BSn5 chromosome, complete genomerRNA large subunit methyltransferase6e-52202
NC_017195:3919000:393908539390853939564480Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein6e-52202
NC_014479:3939183:395827339582733958752480Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative rRNA large subunit methyltransferase5e-52202
NC_000964:4116104:413346041334604133939480Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein5e-52202
NC_014614:2643203:266329326632932663772480Clostridium sticklandii, complete genomehypothetical protein2e-51201
UCMB5137:3601629:361865636186563619135480Bacillus atrophaeus UCMB-5137rRNA large subunit methyltransferase2e-51201
NC_016023:1419217:142567614256761426155480Bacillus coagulans 36D1 chromosome, complete genomeribosomal RNA large subunit methyltransferase H2e-51201
NC_015690:8614000:862798886279888628467480Paenibacillus mucilaginosus KNP414 chromosome, complete genomeRlmH9e-51198
NC_013406:7024149:705787270578727058351480Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein1e-50198
NC_012472:5239944:524100452410045241507504Bacillus cereus 03BB102, complete genomeconserved hypothetical protein TIGR002467e-50196
NC_011658:5239509:524052452405245241027504Bacillus cereus AH187 chromosome, complete genomerRNA large subunit methyltransferase7e-50196
NC_016779:5189139:519439951943995194902504Bacillus cereus F837/76 chromosome, complete genome50S m3Psi1915 methyltransferase RlmH7e-50196
NC_004722:5381208:538329553832955383774480Bacillus cereus ATCC 14579, complete genomehypothetical protein5e-50196
NC_017200:5325977:532699253269925327471480Bacillus thuringiensis serovar finitimus YBT-020 chromosome,rRNA large subunit methyltransferase4e-50196
NC_014335:5165211:516708651670865167619534Bacillus cereus biovar anthracis str. CI chromosome, completeputative cytoplasmic protein9e-50195
NC_016771:5191937:519295251929525193500549Bacillus cereus NC7401, complete genomehypothetical protein9e-50195
NC_007530:5197854:519891451989145199462549Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein9e-50195
NC_006274:5267585:527252952725295273077549Bacillus cereus E33L, complete genomehypothetical protein9e-50195
NC_005957:5203915:520917552091755209723549Bacillus thuringiensis serovar konkukian str. 97-27, completehypothetical protein2e-49194
NC_009637:302881:307860307860308339480Methanococcus maripaludis C7 chromosome, complete genomerRNA large subunit methyltransferase3e-49193
NC_005791:1028500:103051410305141030993480Methanococcus maripaludis S2, complete genomehypothetical protein3e-49193
NC_006582:4256915:427346142734614273940480Bacillus clausii KSM-K16, complete genomehypothetical protein3e-49193
NC_009975:1500978:151545115154511515930480Methanococcus maripaludis C6, complete genomeprotein of unknown function DUF1635e-49192
NC_009135:494949:510246510246510725480Methanococcus maripaludis C5, complete genomeprotein of unknown function DUF1637e-49192
NC_014616:213118:216554216554217033480Bifidobacterium bifidum S17 chromosome, complete genomeSPOUT methyltransferase7e-49192
NC_014638:183115:186551186551187030480Bifidobacterium bifidum PRL2010 chromosome, complete genomehypothetical protein1e-48191
NC_016641:1530905:154042915404291540908480Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-48191
NC_008262:2824503:284623028462302846709480Clostridium perfringens SM101, complete genomeconserved hypothetical protein TIGR002466e-48189
NC_019897:128610:144436144436144915480Thermobacillus composti KWC4 chromosome, complete genomerRNA large subunit m3Psi methyltransferase RlmH1e-47188
NC_015847:1119666:112462811246281125107480Methanococcus maripaludis XI chromosome, complete genomerRNA large subunit methyltransferase5e-47186
NC_021182:4829000:485184848518484852327480Clostridium pasteurianum BC1, complete genomerRNA large subunit m3Psi methyltransferase RlmH1e-46185
NC_009634:411599:416728416728417207480Methanococcus vannielii SB chromosome, complete genomerRNA large subunit methyltransferase9e-46182
NC_008497:32160:399453994540424480Lactobacillus brevis ATCC 367, complete genomehypothetical protein2e-45181
NC_011899:2165814:218444821844482184927480Halothermothrix orenii H 168, complete genomeconserved hypothetical protein TIGR002462e-45181
NC_013171:312500:325101325101325583483Anaerococcus prevotii DSM 20548, complete genomeprotein of unknown function DUF1633e-45180
NC_015759:726612:726612726612727091480Weissella koreensis KACC 15510 chromosome, complete genomerRNA large subunit methyltransferase6e-43172
NC_015437:2354429:235675823567582357237480Selenomonas sputigena ATCC 35185 chromosome, complete genomeConserved hypothetical protein CHP002462e-42171
NC_014654:391201:410350410350410829480Halanaerobium sp. 'sapolanicus' chromosome, complete genomeprotein of unknown function DUF1637e-39159
NC_017068:130226:150160150160150639480Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative ribosomal RNA large subunit methyltransferase H3e-36150
NC_008095:1428665:145236014523601452824465Myxococcus xanthus DK 1622, complete genomehypothetical protein3e-28124
NC_013515:1125739:112653411265341126998465Streptobacillus moniliformis DSM 12112, complete genomeprotein of unknown function DUF1634e-27120
NC_009328:3504454:351561635156163515906291Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein3e-27120
NC_016148:951446:969848969848970312465Thermovirga lienii DSM 17291 chromosome, complete genomehypothetical protein7e-27119
NC_011979:646518:676675676675677136462Geobacter sp. FRC-32, complete genomeprotein of unknown function DUF1639e-27119
NC_013895:1429023:143217514321751432639465Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeputative rRNA large subunit m3Psi methyltransferase RlmH1e-26119
NC_016630:1890917:190497319049731905419447Filifactor alocis ATCC 35896 chromosome, complete genomealpha/beta knot family protein2e-25114
NC_016609:4997414:500283850028385003311474Niastella koreensis GR20-10 chromosome, complete genomeribosomal RNA large subunit methyltransferase H7e-24109
NC_019949:631561:646563646563646997435Mycoplasma cynos C142 complete genomeRibosomal RNA large subunit methyltransferase H2e-22104
NC_010162:5129270:514376351437635144200438Sorangium cellulosum 'So ce 56', complete genomehypothetical protein1e-21102
NC_014623:2283253:230070323007032301062360Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein3e-2097.4
NC_009654:3215205:322634532263453226812468Marinomonas sp. MWYL1, complete genomehypothetical protein7e-2096.3
NC_008262:2824503:283485728348572835111255Clostridium perfringens SM101, complete genomeuncharacterized conserved protein, YbeA family8e-2095.9
NC_013722:2919560:294256429425642943034471Xanthomonas albilineans, complete genomehypothetical protein1e-1995.5
NC_010084:1054000:107418310741831074653471Burkholderia multivorans ATCC 17616 chromosome 1, completerRNA large subunit methyltransferase3e-1994.4
NC_007516:1086948:110953511095351109969435Synechococcus sp. CC9605, complete genomehypothetical protein3e-1994
NC_011206:2512667:253525625352562535729474Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF1637e-1992.8
NC_003047:3419212:344590634459063446451546Sinorhizobium meliloti 1021, complete genomehypothetical protein1e-1892.4
NC_008752:3511006:352783535278353528302468Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein of unknown function DUF1631e-1892
NC_015138:2299100:230244723024472302914468Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein2e-1891.3
NC_015136:1141925:116256011625601163030471Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein3e-1890.9
NC_014752:324832:325939325939326409471Neisseria lactamica ST-640, complete genomehypothetical protein6e-1786.7
NC_012803:361127:361127361127361573447Micrococcus luteus NCTC 2665, complete genomeconserved hypothetical protein TIGR002468e-1786.3
NC_005071:671084:686310686310686744435Prochlorococcus marinus str. MIT 9313, complete genomehypothetical protein9e-1785.9
NC_017095:2058921:207777720777772078238462Fervidobacterium pennivorans DSM 9078 chromosome, complete genomehypothetical protein9e-1785.9
NC_010161:205500:231536231536232018483Bartonella tribocorum CIP 105476, complete genomehypothetical protein8e-1785.9
NC_014932:1232346:123234612323461232828483Bartonella clarridgeiae 73, complete genomehypothetical protein1e-1685.5
NC_020301:174467:205531205531206013483Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomerRNA large subunit methyltransferase4e-1683.6
NC_009348:1064664:109596810959681096435468Aeromonas salmonicida subsp. salmonicida A449, complete genomerRNA large subunit methyltransferase9e-1682.8
NC_006677:1255079:125859412585941259052459Gluconobacter oxydans 621H, complete genomehypothetical protein1e-1479
NC_009616:183772:195027195027195485459Thermosipho melanesiensis BI429 chromosome, complete genomehypothetical protein2e-1375.1
NC_013939:1902397:192036819203681920799432Deferribacter desulfuricans SSM1, complete genomehypothetical protein8e-1372.8
NC_014935:836868:848587848587849048462Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein1e-1065.5
NC_012039:185607:187875187875188330456Campylobacter lari RM2100, complete genomeconserved hypothetical protein (DUF163 domain protein)8e-1062.8
NC_014166:681290:686055686055686516462Arcobacter nitrofigilis DSM 7299 chromosome, complete genomehypothetical protein9e-1062.8
NC_017187:422698:425528425528425983456Arcobacter butzleri ED-1, complete genomehypothetical protein3e-0961.2
NC_009850:445000:447887447887448366480Arcobacter butzleri RM4018, complete genomeconserved hypothetical protein (DUF163 domain protein)3e-0961.2