Pre_GI: BLASTP Hits

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Query: NC_010079:15441:27485 Staphylococcus aureus subsp. aureus USA300_TCH1516, complete

Start: 27485, End: 28819, Length: 1335

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009641:15421:2743827438287991362Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein0912
NC_016912:15414:2746427464287981335Staphylococcus aureus subsp. aureus VC40 chromosome, completehypothetical protein0910
NC_002951:15441:2748527485288191335Staphylococcus aureus subsp. aureus COL, complete genomeyycH protein0910
NC_009632:16238:2759127591289251335Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein0907
NC_013450:16000:2746727467288011335Staphylococcus aureus subsp. aureus ED98, complete genomehypothetical protein0907
NC_017337:16000:2745427454287881335Staphylococcus aureus subsp. aureus ED133 chromosome, completeyycH protein0907
NC_017343:16000:2746727467288011335Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeyycH family protein0907
NC_017351:15413:2746027460287941335Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeyycH family protein0907
NC_017338:14886:2691926919282531335Staphylococcus aureus subsp. aureus JKD6159 chromosome, completetwo-component regulator YycH0907
NC_002745:16000:2744027440288011362Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein0906
NC_009782:16000:2744127441288021362Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein0906
NC_002758:16000:2744127441288021362Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein0906
NC_007622:16000:2768327683290261344Staphylococcus aureus RF122, complete genomehypothetical protein0904
NC_002953:15416:2746327463287971335Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein0904
NC_003923:15416:2746327463287971335Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein0904
NC_016928:16869:2821728217295511335Staphylococcus aureus subsp. aureus M013 chromosome, completehypothetical protein0904
NC_017347:16000:2735327353286871335Staphylococcus aureus subsp. aureus T0131 chromosome, completehypothetical protein0902
NC_017341:14970:2692126921282551335Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,two-component regulator YycH0902
NC_002952:15405:2743627436287701335Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein0902
NC_017342:483359:4916664916664930001335Staphylococcus aureus subsp. aureus TCH60 chromosome, completehypothetical protein0896
NC_007793:15441:2753627536288191284Staphylococcus aureus subsp. aureus USA300, complete genomeYycH protein0879
NC_007795:15414:2751527515287981284Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein0879
NC_016941:14658:2739027390287241335Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein0877
NC_009487:16169:2767827678288561179Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein0803
NC_004461:1:2743127431287771347Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein0676
NC_002976:2580485:2587910258791025892471338Staphylococcus epidermidis RP62A, complete genomeyycH protein0672
NC_007168:16431:2570625706270371332Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein9e-160563
NC_016023:1419217:1421034142103414223171284Bacillus coagulans 36D1 chromosome, complete genomeYycH family protein3e-23109
NC_015634:3017564:3042547304254730438301284Bacillus coagulans 2-6 chromosome, complete genomeYycH family protein1e-22108
NC_009328:3504454:3519284351928435206241341Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein4e-22106
NC_005957:5203915:5212793521279352141091317Bacillus thuringiensis serovar konkukian str. 97-27, completehypothetical protein1e-1998.2
NC_012659:5200831:5202432520243252037541323Bacillus anthracis str. A0248, complete genomeYycH protein1e-1997.8
NC_007530:5197854:5202532520253252038481317Bacillus anthracis str. 'Ames Ancestor', complete genomeyych protein1e-1997.8
NC_003997:5200805:5202406520240652037221317Bacillus anthracis str. Ames, complete genomeYycH protein1e-1997.8
NC_005945:5202176:5203777520377752050931317Bacillus anthracis str. Sterne, complete genomeYycH protein1e-1997.8
NC_016779:5189139:5198017519801751993331317Bacillus cereus F837/76 chromosome, complete genomehypothetical protein2e-1790.9
NC_011658:5239509:5244142524414252454581317Bacillus cereus AH187 chromosome, complete genomeYycH protein2e-1790.9
NC_016771:5191937:5196570519657051978861317Bacillus cereus NC7401, complete genomeyycH protein2e-1790.9
NC_014335:5165211:5170704517070451720201317Bacillus cereus biovar anthracis str. CI chromosome, completemembrane protein YycH2e-1790.5
NC_012472:5239944:5244622524462252459381317Bacillus cereus 03BB102, complete genomeYycH protein3e-1790.1
NC_017200:5325977:5330610533061053319261317Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein4e-1789.7
NC_006274:5267585:5276147527614752774631317Bacillus cereus E33L, complete genomehypothetical protein5e-1789.4
NC_004722:5381208:5386914538691453882301317Bacillus cereus ATCC 14579, complete genomehypothetical membrane protein yycH2e-1687
NC_004193:3578710:3586261358626135875621302Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-1480.9
NC_006322:4149500:4182859418285941842231365Bacillus licheniformis ATCC 14580, complete genomeYycH2e-1377.4
NC_006270:4149004:4182744418274441841081365Bacillus licheniformis ATCC 14580, complete genomeconserved hypothetical YycH2e-1377.4
NC_009848:3631243:3653107365310736544951389Bacillus pumilus SAFR-032, complete genomehypothetical protein2e-1170.9
NC_006582:4256915:4277437427743742787651329Bacillus clausii KSM-K16, complete genomehypothetical protein6e-0962.4
NC_008497:32160:3476434764360651302Lactobacillus brevis ATCC 367, complete genomehypothetical protein8e-0755.5