Pre_GI: BLASTP Hits

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Query: NC_010079:15441:15441 Staphylococcus aureus subsp. aureus USA300_TCH1516, complete

Start: 15441, End: 15770, Length: 330

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017351:15413:154131541315742330Staphylococcus aureus subsp. aureus 11819-97 chromosome, completebranched-chain amino acid transport family protein2e-43174
NC_007793:15441:154411544115770330Staphylococcus aureus subsp. aureus USA300, complete genomehypothetical protein2e-43174
NC_002953:15416:154161541615745330Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein2e-43174
NC_007795:15414:154141541415743330Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein2e-43174
NC_002952:15405:154051540515734330Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein2e-43174
NC_003923:15416:154161541615745330Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-43174
NC_002951:15441:154411544115770330Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein2e-43174
NC_009641:15421:154211542115750330Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein2e-43174
NC_016912:15414:154141541415743330Staphylococcus aureus subsp. aureus VC40 chromosome, completehypothetical protein2e-43174
NC_017338:14886:148861488615215330Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeBranched-chain amino acid transport protein, AzlD1e-42171
NC_016941:14658:153501535015679330Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein3e-39160
NC_017341:14970:149701497015218249Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Branched-chain amino acid transport protein, AzlD8e-29125
NC_004461:1:155181551815847330Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein1e-27121
NC_002976:2580485:260084326008432601172330Staphylococcus epidermidis RP62A, complete genomehypothetical protein1e-27121
NC_009725:2784334:280356628035662803889324Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein1e-1168.6
NC_015978:113656:117837117837118163327Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein4e-0856.6