Pre_GI: BLASTP Hits

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Query: NC_010067:892729:917068 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 917068, End: 917343, Length: 276

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1987291:1996529199652919978031275Salmonella enterica subsp. enterica serovar Agona str. SL483,integrase2e-29127
NC_011274:2044000:2052521205252120538611341Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage integrase4e-29126
NC_016831:947281:9806799806799819531275Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphage integrase5e-29126
NC_011294:2053991:2061363206136320626371275Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase5e-29126
NC_011205:2180598:2188380218838021896541275Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase5e-29125
NC_011601:2139188:2171614217161421728821269Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase8e-29125
NC_013421:1696746:1714725171472517160021278Pectobacterium wasabiae WPP163, complete genomeintegrase family protein4e-28123
NC_011745:2209288:2237821223782122390951275Escherichia coli ED1a chromosome, complete genomeProphage integrase8e-28122
NC_012880:2871480:2879871287987128811571287Dickeya dadantii Ech703, complete genomeintegrase family protein8e-28122
NC_016832:948029:9751729751729764461275Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,CP4-like integrase6e-28122
NC_004547:3207776:3236381323638132376671287Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeintegrase1e-27121
NC_004547:1873390:1925682192568219269591278Erwinia carotovora subsp. atroseptica SCRI1043, complete genomephage integrase4e-27119
NC_015061:1251905:1270945127094512721801236Rahnella sp. Y9602 chromosome, complete genomeintegrase family protein6e-2199.4
CU928145:4792703:4806663480666348079251263Escherichia coli 55989 chromosome, complete genomeProphage integrase4e-2096.7
NC_004741:3041294:3044913304491330461751263Shigella flexneri 2a str. 2457T, complete genomeputative P4-type integrase4e-2096.7
NC_011748:4792703:4806663480666348079251263Escherichia coli 55989, complete genomeProphage integrase4e-2096.7
NC_004337:3049118:3052737305273730539991263Shigella flexneri 2a str. 301, complete genomeputative P4-type integrase4e-2096.7
NC_017328:3088907:3092526309252630937881263Shigella flexneri 2002017 chromosome, complete genomeSite-specific recombinase, phage integrase family protein4e-2096.7
NC_013716:5201097:5270252527025252715141263Citrobacter rodentium ICC168, complete genomeintegrase5e-2096.3
NC_008253:3122148:3128357312835731296221266Escherichia coli 536, complete genomeputative P4-type integrase5e-2096.3
NC_013364:3701895:3705514370551437067731260Escherichia coli O111:H- str. 11128, complete genomeputative integrase5e-2096.3
NC_016514:506611:5140645140645153201257Enterobacter cloacae EcWSU1 chromosome, complete genomeprophage P4 integrase1e-1995.1
NC_011741:4570498:4575920457592045771701251Escherichia coli IAI1 chromosome, complete genomeProphage integrase1e-1995.1
CU928160:4570498:4575920457592045771701251Escherichia coli IAI1 chromosome, complete genomeProphage integrase1e-1995.1
NC_013971:3296272:3324214332421433254911278Erwinia amylovora ATCC 49946 chromosome, complete genomeintegrase1e-1994.7
NC_013961:441719:4457984457984470751278Erwinia amylovora, complete genomeIntegrase1e-1994.7
NC_004431:4955658:4970125497012549713871263Escherichia coli CFT073, complete genomeProphage P4 integrase2e-1994.4
NC_010067:3204682:3207340320734032085991260Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1994.4
NC_007384:3383983:3401956340195634029601005Shigella sonnei Ss046, complete genome2e-1994.4
NC_004547:3207776:3226143322614332273961254Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeintegrase2e-1994.4
NC_012912:4012112:4016665401666540179241260Dickeya zeae Ech1591, complete genomeintegrase family protein2e-1994.4
NC_013421:478586:4830894830894843481260Pectobacterium wasabiae WPP163, complete genomeintegrase family protein3e-1994
AP010958:5090696:5118420511842051196851266Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative integrase3e-1994
AP010958:3627355:3627355362735536286201266Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative integrase3e-1994
NC_011601:3338888:3338888333888833401531266Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase3e-1994
NC_012125:4716000:4722575472257547238221248Salmonella enterica subsp. enterica serovar Paratyphi C strainintegrase3e-1994
NC_013353:3627355:3627355362735536286201266Escherichia coli O103:H2 str. 12009, complete genomeintegrase3e-1994
NC_013353:5090696:5118420511842051196851266Escherichia coli O103:H2 str. 12009, complete genomeintegrase3e-1994
NC_002655:3919545:3919545391954539208101266Escherichia coli O157:H7 EDL933, complete genomeputative pathogenicity island integrase3e-1994
NC_011750:3545466:3545739354573935470041266Escherichia coli IAI39 chromosome, complete genomeProphage integrase2e-1994
NC_013592:446092:4505684505684518211254Dickeya dadantii Ech586, complete genomeintegrase family protein2e-1994
NC_013941:3676146:3676146367614636774111266Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeSite-specific recombinase, phage integrase family protein3e-1994
NC_013008:3911356:3911356391135639126211266Escherichia coli O157:H7 str. TW14359 chromosome, complete genomepathogenicity island integrase3e-1994
NC_011353:3956630:3956630395663039578951266Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesite-specific recombinase, phage integrase family protein3e-1994
NC_002695:3852233:3852233385223338534981266Escherichia coli O157:H7 str. Sakai, complete genomeintegrase3e-1994
NC_012917:569856:5834835834835847421260Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein3e-1993.6
NC_012880:3982383:3987035398703539883091275Dickeya dadantii Ech703, complete genomeintegrase family protein4e-1993.2
NC_020418:116500:1488691488691501371269Morganella morganii subsp. morganii KT, complete genomeprophage integrase5e-1993.2
NC_011745:4862218:4879739487973948810011263Escherichia coli ED1a chromosome, complete genomeProphage integrase6e-1992.8
NC_012880:3529017:3532001353200135332601260Dickeya dadantii Ech703, complete genomeintegrase family protein6e-1992.8
NC_015663:1902344:1922832192283219240881257Enterobacter aerogenes KCTC 2190 chromosome, complete genomeprothage integrase6e-1992.8
NC_012917:985617:9985629985629998211260Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein5e-1992.8
NC_013421:3752619:3755687375568737569461260Pectobacterium wasabiae WPP163, complete genomeintegrase family protein5e-1992.8
NC_009436:3117661:3125655312565531269051251Enterobacter sp. 638, complete genomephage integrase family protein5e-1992.8
NC_020418:116500:1294051294051306791275Morganella morganii subsp. morganii KT, complete genomeprophage integrase9e-1992
NC_012967:4473368:4479978447997844811681191Escherichia coli B str. REL606 chromosome, complete genomeputative integrase1e-1892
NC_012947:3917619:3932940393294039341301191Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase1e-1892
NC_014500:1066911:1087070108707010883291260Dickeya dadantii 3937 chromosome, complete genomeIntegrase1e-1891.7
NC_000913:4494773:4494773449477344959631191Escherichia coli K12, complete genomeKpLE2 phage-like element; predicted integrase1e-1891.7
NC_010473:4596500:4596581459658145977711191Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; predicted integrase1e-1891.7
AC_000091:4501430:4501430450143045026201191Escherichia coli W3110 DNA, complete genomepredicted integrase1e-1891.7
NC_011750:4947500:4950895495089549520851191Escherichia coli IAI39 chromosome, complete genomeputative integrase; KpLE2 phage-like element1e-1891.7
NC_009648:3720000:372189037218903722753864Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative phage integrase2e-1891.3
NC_003198:4513900:4541654454165445429131260Salmonella enterica subsp. enterica serovar Typhi str. CT18,bacteriophage integrase2e-1891.3
NC_009381:3680638:3701106370110637023651260Yersinia pestis Pestoides F chromosome, complete genomeintegrase2e-1890.9
NC_020063:4127161:4140010414001041412631254Enterobacteriaceae bacterium strain FGI 57, complete genomeIntegrase2e-1890.9
NC_013592:956829:9771269771269783851260Dickeya dadantii Ech586, complete genomeintegrase family protein2e-1890.5
NC_008258:4345400:4363338436333843645311194Shigella flexneri 5 str. 8401, complete genomeputative P4-type integrase3e-1890.5
NC_011283:5011497:5023932502393250252061275Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase4e-1890.1
CP002185:4750571:4754674475467447559421269Escherichia coli W, complete genome4e-1890.1
NC_008253:4735418:4735418473541847366801263Escherichia coli 536, complete genomeprophage P4 integrase4e-1890.1
NC_009436:522649:5237605237605250221263Enterobacter sp. 638, complete genomephage integrase family protein3e-1890.1
NC_004337:4374500:4394738439473843959491212Shigella flexneri 2a str. 301, complete genomeputative P4-type integrase3e-1890.1
NC_004741:4364235:4386934438693443881451212Shigella flexneri 2a str. 2457T, complete genomeputative P4-type integrase3e-1890.1
NC_017328:4417000:4438449443844944396601212Shigella flexneri 2002017 chromosome, complete genomeputative P4-type integrase3e-1890.1
NC_016830:381049:3948993948993959811083Pseudomonas fluorescens F113 chromosome, complete genomeintegrase4e-1889.7
NC_009648:5119271:5126372512637251278591488Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative phage integrase6e-1889.7
NC_012731:560199:5662635662635679451683Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeintegrase8e-1889
NC_010501:5442000:5448592544859254499111320Pseudomonas putida W619, complete genomeintegrase family protein1e-1788.6
NC_016612:2009927:2022458202245820237231266Klebsiella oxytoca KCTC 1686 chromosome, complete genomephage integrase family protein1e-1788.6
NC_012214:1650523:1670282167028216714991218Erwinia pyrifoliae Ep1/96, complete genomePhage integrase family protein1e-1788.2
NC_015733:715947:7195827195827208771296Pseudomonas putida S16 chromosome, complete genomephage integrase family protein2e-1787.4
NC_015968:3301958:3321719332171933230081290Enterobacter asburiae LF7a chromosome, complete genomeintegrase family protein3e-1787.4
NC_013892:3278647:3282924328292432841951272Xenorhabdus bovienii SS-2004 chromosome, complete genomeKpLE2 phage-like element; P4-like integrase5e-1786.3
NC_010694:436500:4418324418324428841053Erwinia tasmaniensis, complete genomePutative P4-type integrase1e-1684.7
NC_012912:1701231:1731524173152417327951272Dickeya zeae Ech1591, complete genomeintegrase family protein2e-1684.3
NC_011283:1811000:1879467187946718807351269Klebsiella pneumoniae 342 chromosome, complete genomeintegrase2e-1684.3
NC_007712:3629358:364218736421873643062876Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase3e-1684
NC_002695:5352554:535752053575205358347828Escherichia coli O157:H7 str. Sakai, complete genomeputative integrase3e-1684
NC_011353:5426793:543116854311685431995828Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage P4 integrase3e-1684
NC_002655:5382557:538744553874455388350906Escherichia coli O157:H7 EDL933, complete genomepartial putative integrase2e-1684
NC_013008:5382917:538715153871515388056906Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase2e-1684
NC_013941:5192500:519570751957075196612906Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprophage P4 integrase2e-1684
NC_007492:3462929:3504962350496235062781317Pseudomonas fluorescens PfO-1, complete genomePhage integrase4e-1683.2
NC_003198:4676536:4683853468385346851181266Salmonella enterica subsp. enterica serovar Typhi str. CT18,integrase6e-1682.8
NC_004631:4661000:4666742466674246680071266Salmonella enterica subsp. enterica serovar Typhi Ty2, completeintegrase6e-1682.8
NC_007613:4217557:4227410422741042286751266Shigella boydii Sb227, complete genomeputative P4-type integrase6e-1682.8
NC_017047:2079368:2111770211177021128821113Rahnella aquatilis HX2 chromosome, complete genomeintegrase family protein6e-1682.8
NC_016845:575123:5819525819525832141263Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative P4-type integrase6e-1682.8
NC_013592:1668092:1675312167531216765951284Dickeya dadantii Ech586, complete genomeintegrase family protein7e-1682.4
NC_011080:4703266:4709793470979347110581266Salmonella enterica subsp. enterica serovar Newport str. SL254,integrase8e-1682.4
NC_014500:3097362:3126671312667131279541284Dickeya dadantii 3937 chromosome, complete genomeIntegrase1e-1582
NC_012912:4194821:4203430420343042046891260Dickeya zeae Ech1591, complete genomeintegrase family protein2e-1581.3
NC_012880:4117376:4124824412482441260831260Dickeya dadantii Ech703, complete genomeintegrase family protein2e-1581.3
NC_014306:4376012:4416594441659444178471254Erwinia billingiae Eb661, complete genomeIntegrase2e-1581.3
NC_014500:443874:4519574519574532191263Dickeya dadantii 3937 chromosome, complete genomeIntegrase2e-1580.9
NC_016612:5231065:5252187525218752534551269Klebsiella oxytoca KCTC 1686 chromosome, complete genomeintegrase family protein2e-1580.9
NC_013421:1819036:1844711184471118459821272Pectobacterium wasabiae WPP163, complete genomeintegrase family protein7e-1579.3
NC_011283:1901229:1912830191283019140981269Klebsiella pneumoniae 342 chromosome, complete genomeintegrase7e-1579.3
NC_011283:1811000:1864670186467018659201251Klebsiella pneumoniae 342 chromosome, complete genomeintegrase1e-1478.2
NC_013592:2968500:2972189297218929734601272Dickeya dadantii Ech586, complete genomeintegrase family protein2e-1477.8
NC_016818:2836851:2844402284440228456701269Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeIntegrase6e-1476.3
NC_013716:2139952:2167956216795621692181263Citrobacter rodentium ICC168, complete genomeintegrase8e-1475.9
NC_020181:527592:5664205664205676761257Enterobacter aerogenes EA1509E, complete genomeIntegrase1e-1375.1
NC_008253:1938975:1971537197153719725801044Escherichia coli 536, complete genomeP4-like integrase3e-1373.9
NC_004431:2185750:2218378221837822194211044Escherichia coli CFT073, complete genomeProphage P4 integrase3e-1373.9
NC_010468:1816359:1844582184458218458441263Escherichia coli ATCC 8739, complete genome5e-1373.2
NC_010159:2164500:2196574219657421978361263Yersinia pestis Angola, complete genomesite-specific recombinase, phage integrase family6e-1372.8
NC_020181:527592:5321935321935334551263Enterobacter aerogenes EA1509E, complete genomeIntegrase6e-1372.8
NC_003143:2137945:2169863216986321711251263Yersinia pestis CO92, complete genomeintegrase6e-1372.8
NC_004088:2640440:2645673264567326469351263Yersinia pestis KIM, complete genomeprophage integrase6e-1372.8
NC_005810:1794490:1826607182660718278691263Yersinia pestis biovar Microtus str. 91001, complete genomeintegrase6e-1372.8
NC_008150:1420825:1452942145294214542041263Yersinia pestis Antiqua, complete genomeintegrase6e-1372.8
NC_009381:1362471:1365074136507413663361263Yersinia pestis Pestoides F chromosome, complete genomeintegrase6e-1372.8
NC_017154:2137500:2169431216943121706931263Yersinia pestis D106004 chromosome, complete genomeintegrase6e-1372.8
NC_017160:2362002:2367208236720823684701263Yersinia pestis D182038 chromosome, complete genomeintegrase6e-1372.8
NC_009348:4135002:4156238415623841574521215Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase2e-1064.7
NC_005085:659378:6806636806636818561194Chromobacterium violaceum ATCC 12472, complete genomeprophage CP4-like integrase8e-0958.9
NC_016002:2037374:2066998206699820681851188Pseudogulbenkiania sp. NH8B, complete genomephage integrase family protein2e-0858.2
NC_015224:3291736:3302103330210333032661164Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Integrase3e-0857.4
NC_013592:4295449:4306509430650943076961188Dickeya dadantii Ech586, complete genomeintegrase family protein4e-0856.6
NC_011083:2542876:2550781255078125520101230Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,integrase1e-0755.5
NC_006138:432000:4540574540574552561200Desulfotalea psychrophila LSv54, complete genomeprophage integrase1e-0755.5
NC_014972:247028:2542652542652554071143Desulfobulbus propionicus DSM 2032 chromosome, complete genome1e-0755.5
NC_011283:4438500:4452425445242544536391215Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase3e-0753.9
NC_008800:4488112:4502800450280045040141215Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative phage integrase3e-0753.9
NC_020304:752012:7729487729487741561209Desulfocapsa sulfexigens DSM 10523, complete genomeIntegrase3e-0753.9
NC_015663:5253242:5261147526114752623521206Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative integrase4e-0753.5
NC_004337:3590323:3806770380677038079811212Shigella flexneri 2a str. 301, complete genomeputative integrase4e-0753.5
NC_014306:4901390:4945226494522649464011176Erwinia billingiae Eb661, complete genomePhage integrase5e-0753.1
NC_004431:4270305:4274702427470242758861185Escherichia coli CFT073, complete genomePutative prophage integrase5e-0753.1
NC_012967:3769499:3775658377565837768421185Escherichia coli B str. REL606 chromosome, complete genomeInt5e-0753.1
NC_011992:3375929:3381510338151033827961287Acidovorax ebreus TPSY, complete genomeintegrase family protein5e-0753.1
NC_008789:1237969:1242815124281512440531239Halorhodospira halophila SL1, complete genomephage integrase family protein6e-0752.8
NC_014500:3744705:3763439376343937646531215Dickeya dadantii 3937 chromosome, complete genomeIntegrase7e-0752.8
NC_016902:44744:6181561815630381224Escherichia coli KO11FL chromosome, complete genomeintegrase family protein8e-0752.4
CP002516:44744:6181561815630381224Escherichia coli KO11, complete genomeintegrase family protein8e-0752.4
CP002185:4035502:4043035404303540442581224Escherichia coli W, complete genomeputative integrase8e-0752.4
NC_004547:3866439:3878830387883038800561227Erwinia carotovora subsp. atroseptica SCRI1043, complete genomephage integrase1e-0652
NC_015224:4426167:4437677443767744388461170Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative phage integrase1e-0652
NC_003295:998000:1017298101729810184731176Ralstonia solanacearum GMI1000, complete genomePROBABLE CP4-LIKE INTEGRASE PROTEIN1e-0652
NC_017160:4508000:4519840451984045210331194Yersinia pestis D182038 chromosome, complete genomeputative phage integrase1e-0651.6
NC_008150:4634695:4641845464184546430381194Yersinia pestis Antiqua, complete genomeputative phage integrase1e-0651.6
NC_015663:1356982:1363591136359113647751185Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-0651.6
NC_009832:110239:1164641164641176331170Serratia proteamaculans 568, complete genomeintegrase family protein2e-0651.6
NC_012917:3198000:3204199320419932053891191Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein2e-0651.2
NC_013941:4470932:4470932447093244721851254Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCP4-like integrase2e-0651.2
NC_008253:3941938:3948173394817339493541182Escherichia coli 536, complete genomeputative phage integrase3e-0650.8
NC_013508:876431:8847268847268859491224Edwardsiella tarda EIB202, complete genomeputative site specific integrase3e-0650.8
NC_010465:62348:6970669706708961191Yersinia pseudotuberculosis YPIII, complete genomeintegrase family protein3e-0650.8
NC_009800:320115:3338373338373350451209Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family protein2e-0650.8
NC_010498:301000:3068793068793080631185Escherichia coli SMS-3-5, complete genomephage integrase family site specific recombinase2e-0650.8
NC_016832:3100683:310737031073703107714345Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hcp2e-0650.8
NC_009524:1488714:1495159149515914963671209Psychrobacter sp. PRwf-1 chromosome, complete genomephage integrase family protein3e-0650.4
NC_013361:4959323:4965243496524349664121170Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintegrase3e-0650.4
NC_016514:891772:8998788998789011371260Enterobacter cloacae EcWSU1 chromosome, complete genomeprophage CPS-53 integrase4e-0650.1
NC_010498:4072681:4081597408159740827601164Escherichia coli SMS-3-5, complete genomephage integrase family site specific recombinase4e-0650.1
NC_020211:996497:1003680100368010048461167Serratia marcescens WW4, complete genomeputative site specific integrase6e-0649.7
NC_011662:1017933:1017933101793310192011269Thauera sp. MZ1T, complete genomeintegrase family protein7e-0649.3
NC_002655:301940:3107563107563119881233Escherichia coli O157:H7 EDL933, complete genomeintegrase protein for prophage CP-933I8e-0648.9
NC_013941:338121:3517443517443529761233Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeIntegrase for prophage CP-933I9e-0648.9