Pre_GI: BLASTP Hits

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Query: NC_010067:3538169:3538169 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 3538169, End: 3538783, Length: 615

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:4653422:466162746616274662175549Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator8e-91332
NC_016818:3887000:391853439185343919082549Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator4e-82303
NC_020064:2728569:273358927335892734137549Serratia marcescens FGI94, complete genomeputative transcriptional regulator8e-82302
NC_019673:3253650:325551432555143256071558Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, XRE family7e-59226
NC_013510:747042:762300762300762866567Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family4e-58223
NC_020126:7285452:729938772993877299959573Myxococcus stipitatus DSM 14675, complete genomeXRE family transcriptional regulator2e-52205
NC_013947:4363250:437654343765434377166624Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, XRE family8e-25113
NC_004557:1553000:155369415536941554401708Clostridium tetani E88, complete genomeputative transcriptional regulatory protein2e-1892
NC_009617:1487110:149075414907541491308555Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1787.4
NC_008701:391216:3967843967843983341551Pyrobaculum islandicum DSM 4184, complete genometranscriptional regulator, XRE family1e-1686.7
NC_014328:2518081:253808325380832538637555Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein2e-1582.4
NC_009953:2808288:281348928134892814016528Salinispora arenicola CNS-205 chromosome, complete genomeXRE family transcriptional regulator2e-1582
NC_014624:1369642:137228713722871372838552Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein8e-1580.5
NC_014532:1481787:150309715030971503672576Halomonas elongata DSM 2581, complete genomehypothetical protein2e-1479.3
NC_009089:1283000:131939013193901319941552Clostridium difficile 630, complete genomeputative transcriptional regulator5e-1477.8
NC_015563:3979500:399881739988173999386570Delftia sp. Cs1-4 chromosome, complete genomehelix-turn-helix domain-containing protein5e-1477.8
NC_007907:4956500:498991149899114990465555Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1375.5
NC_015566:2328771:233006823300682330631564Serratia sp. AS12 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1273.2
NC_015567:2328782:233007923300792330642564Serratia sp. AS9 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1273.2
NC_014121:4043198:405680640568064057378573Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-1272.4
NC_016645:279232:3038763038763054201545Pyrobaculum sp. 1860 chromosome, complete genometranscriptional regulator, XRE family2e-1272.4
NC_011283:1178500:118395211839521184521570Klebsiella pneumoniae 342 chromosome, complete genomeDNA-binding protein3e-1272
NC_009617:4805413:480886648088664809417552Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeXRE family transcriptional regulator1e-1169.7
NC_006932:1795500:1799556179955618015081953Brucella abortus biovar 1 str. 9-941 chromosome I, completetranscriptional regulator, Cro/CI family1e-1169.7
NC_010742:1794000:1797845179784517997971953Brucella abortus S19 chromosome 1, complete sequencetranscriptional regulator, Cro/CI family1e-1169.7
NC_010103:1777000:1780871178087117828231953Brucella canis ATCC 23365 chromosome I, complete sequencehypothetical protein1e-1169.7
NC_010167:1287000:1290803129080312927551953Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein1e-1169.7
NC_016885:417661:4347374347374362871551Pyrobaculum oguniense TE7 chromosome, complete genomeputative transcriptional regulator2e-1168.9
NC_004310:1777721:1782720178272017846481929Brucella suis 1330 chromosome I, complete sequencetranscriptional regulator, Cro/CI family3e-1168.6
NC_015857:1809500:1813481181348118154091929Brucella pinnipedialis B2/94 chromosome chromosome 1, completeCro/CI family transcriptional regulator3e-1168.6
NC_007618:1792500:1796708179670817986361929Brucella melitensis biovar Abortus 2308 chromosome I, completeSAM (and some other nucleotide) binding motif:Helix-turn-helix motif3e-1168.6
NC_008800:2127918:215057121505712151032462Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative DNA-binding protein9e-1167
NC_006085:2384892:239089723908972391763867Propionibacterium acnes KPA171202, complete genomeputative transcriptional regulator2e-1065.9
NC_016512:2322598:232886723288672329460594Propionibacterium acnes TypeIA2 P.acn17 chromosome, completecupin domain protein2e-1065.5
NC_016516:2314115:232039223203922320976585Propionibacterium acnes TypeIA2 P.acn33 chromosome, completecupin domain protein3e-1065.5
NC_016511:2321999:232953423295342330118585Propionibacterium acnes TypeIA2 P.acn31 chromosome, completecupin domain protein3e-1065.5
NC_014039:2320307:232631423263142327180867Propionibacterium acnes SK137 chromosome, complete genomecupin domain protein5e-1064.3
NC_012660:4149487:415199341519934152619627Pseudomonas fluorescens SBW25 chromosome, complete genomeputative DNA binding protein6e-1064.3
NC_010002:3509506:351042335104233510992570Delftia acidovorans SPH-1, complete genometranscriptional regulator, XRE family7e-1063.9
NC_016048:2907702:293945829394582940024567Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein1e-0963.2
NC_012522:7837071:785901578590157859641627Rhodococcus opacus B4, complete genomehypothetical protein9e-0960.1
NC_007435:1825741:184202518420251842633609Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative DNA-binding protein2e-0858.9
NC_009078:3087759:294829483556609Burkholderia pseudomallei 1106a chromosome II, complete sequenceDNA-binding/cupin domain protein2e-0858.9
NC_009075:3113393:294829483556609Burkholderia pseudomallei 668 chromosome II, complete sequenceDNA-binding protein2e-0858.9
NC_007650:2901751:295029503558609Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein2e-0858.9
NC_013939:1535071:155165715516571552193537Deferribacter desulfuricans SSM1, complete genomeXRE family transcriptional regulator4e-0858.2
NC_009079:2339756:408640864694609Burkholderia mallei NCTC 10247 chromosome I, complete sequenceDNA-binding protein4e-0858.2
NC_006351:3159630:294629463554609Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding protein4e-0858.2
NC_008835:1483237:149940114994011500009609Burkholderia mallei NCTC 10229 chromosome I, complete sequenceDNA-binding protein4e-0858.2
NC_008784:1151305:116827711682771168885609Burkholderia mallei SAVP1 chromosome I, complete sequenceDNA-binding protein4e-0858.2
NC_006349:2311817:408640864694609Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceDNA-binding protein4e-0858.2
NC_007948:4558000:460677746067774607370594Polaromonas sp. JS666, complete genometranscriptional regulator, XRE family8e-0857
NC_014654:2311818:232518923251892325725537Halanaerobium sp. 'sapolanicus' chromosome, complete genomeCupin 2 conserved barrel domain protein1e-0756.2
NC_020063:3690308:373506937350693735671603Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator2e-0755.5
NC_015138:693865:707847707847708416570Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehelix-turn-helix domain-containing protein3e-0755.5
UCMB5137:1:101211012110666546Bacillus atrophaeus UCMB-5137unknown4e-0754.7
NC_008148:2498000:252032625203262520988663Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, XRE family with cupin sensor5e-0754.3
NC_017273:352150:357368357368357946579Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completecupin5e-0754.3
NC_016025:552000:561697561697562284588Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative transcriptional regulator1e-0652.8
NC_012791:4794362:481375648137564814277522Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family2e-0652.8
NC_015500:900807:900807900807901394588Treponema brennaborense DSM 12168 chromosome, complete genomehelix-turn-helix domain protein3e-0652
NC_014121:4577324:458073445807344581336603Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-0652
NC_013235:5127148:516150751615075161896390Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, XRE family4e-0651.6
NC_011768:3385719:340604634060463406675630Desulfatibacillum alkenivorans AK-01, complete genometranscriptional regulator, XRE family4e-0651.6