Pre_GI: BLASTP Hits

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Query: NC_010067:3310336:3347212 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 3347212, End: 3348531, Length: 1320

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:4221000:4230471423047142317901320Salmonella enterica subsp. enterica serovar Paratyphi A strtype-I secretion protein0776
NC_006511:4225455:4234784423478442361031320Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative type-I secretion protein0776
NC_010102:4396500:4405820440582044071391320Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0776
NC_003197:4470683:4479864447986444811831320Salmonella typhimurium LT2, complete genomeputative ABC exporter outer membrane component0772
NC_006905:4405301:4414481441448144158001320Salmonella enterica subsp. enterica serovar Choleraesuis strputative ABC exporter outer membrane component homolog0772
NC_011274:4305812:4314993431499343163121320Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type-I secretion protein0772
NC_011294:4327904:4337085433708543384041320Salmonella enterica subsp. enterica serovar Enteritidis strtype-I secretion protein0772
NC_012125:4400636:4409816440981644111351320Salmonella enterica subsp. enterica serovar Paratyphi C strainABC exporter outer membrane component-like protein0772
NC_016810:4491975:4501156450115645024751320Salmonella enterica subsp. enterica serovar Typhimurium strputative type-I secretion protein0772
NC_016856:4482845:4493406449340644947251320Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative ABC exporter outer membrane component0772
NC_016857:4491976:4501157450115745024761320Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative ABC exporter outer membrane component0772
NC_016863:4431831:4441012444101244423311320Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative ABC exporter outer membrane component0772
NC_003198:4315807:4325000432500043263071308Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative type-I secretion protein0765
NC_004631:4300457:4309650430965043109571308Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative type-I secretion protein0765
NC_015761:4098481:4107697410769741090161320Salmonella bongori NCTC 12419, complete genometype-I secretion protein0751
NC_011149:4390315:439988743998874400813927Salmonella enterica subsp. enterica serovar Agona str. SL483,putative type-I secretion protein4e-161568
NC_011080:4461851:447142544714254472351927Salmonella enterica subsp. enterica serovar Newport str. SL254,putative type-I secretion protein5e-161567
NC_011205:4486142:449571644957164496642927Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ABC exporter outer membrane component3e-160565
NC_017046:4490500:450021045002104501136927Salmonella enterica subsp. enterica serovar Typhimurium str. 798type-I secretion protein5e-160564
NC_016860:4575772:458534645853464586272927Salmonella enterica subsp. enterica serovar Typhimurium strABC transporter permease5e-160564
NC_016831:4286000:429573642957364296662927Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type-I secretion protein5e-160564
NC_011094:4361238:437081143708114371737927Salmonella enterica subsp. enterica serovar Schwarzengrund strABC transporter outer membrane protein5e-160564
NC_011083:4466634:447620844762084477134927Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative ABC exporter outer membrane component2e-159561
NC_016832:4288980:429856642985664299480915Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,ABC exporter outer membrane component8e-158556
NC_012881:2405414:2423803242380324253441542Desulfovibrio salexigens DSM 2638, complete genomeouter membrane efflux protein4e-1479.7
NC_013173:8923:2525425254265851332Desulfomicrobium baculatum DSM 4028, complete genometype I secretion outer membrane protein, TolC family8e-1478.6
NC_013889:1382705:1385254138525413867081455Thioalkalivibrio sp. K90mix chromosome, complete genometype I secretion outer membrane protein, TolC family5e-1375.9
NC_014931:5470242:5483322548332254847371416Variovorax paradoxus EPS chromosome, complete genometype I secretion outer membrane protein, TolC family3e-1273.2
NC_007626:3393940:3407013340701334086561644Magnetospirillum magneticum AMB-1, complete genomeOuter membrane protein5e-1065.9
NC_017505:1783476:1783476178347617848791404Neisseria meningitidis alpha710 chromosome, complete genomeputative periplasmic type I secretion system protein8e-1065.5
NC_017517:1807072:1807072180707218083821311Neisseria meningitidis M01-240355 chromosome, complete genomeputative type I secretion outer membrane protein, TolC family1e-0964.7
NC_013716:3109700:3136316313631631378121497Citrobacter rodentium ICC168, complete genomeputative outer membrane efflux protein of T1SS4e-0962.8
NC_007498:357484:3606473606473620711425Pelobacter carbinolicus DSM 2380, complete genomeouter membrane protein OmpK2e-0861.2
NC_011753:1501868:1518258151825815195711314Vibrio splendidus LGP32 chromosome 1, complete genomeouter membrane protein1e-0861.2
NC_020063:1051310:1069391106939110707971407Enterobacteriaceae bacterium strain FGI 57, complete genometype I secretion outer membrane protein, TolC family2e-0860.8
NC_010067:191190:2203772203772217861410Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0860.8
NC_014837:1570500:1588988158898815903071320Pantoea sp. At-9b chromosome, complete genomeouter membrane efflux protein3e-0860.1
NC_020209:5077410:5098684509868451000361353Pseudomonas poae RE*1-1-14, complete genomeTolC family type I secretion outer membrane protein5e-0859.7
NC_019902:97987:1160201160201174771458Thioalkalivibrio nitratireducens DSM 14787, complete genomeAgglutination protein5e-0859.3
NC_012912:2426520:2427879242787924292791401Dickeya zeae Ech1591, complete genometype I secretion outer membrane protein, TolC family3e-0757
NC_015424:2695847:2707416270741627087411326Aeromonas veronii B565 chromosome, complete genometype I secretion outer membrane protein, TolC1e-0654.7
NC_016002:2453919:2476508247650824779741467Pseudogulbenkiania sp. NH8B, complete genomecation/multidrug efflux system, outer membrane channel TolC3e-0653.5
NC_014117:2684631:2696170269617026977021533Burkholderia sp. CCGE1002 chromosome chromosome 1, completeouter membrane efflux protein4e-0653.1
NC_009832:1719149:1749485174948517508641380Serratia proteamaculans 568, complete genometype I secretion outer membrane protein, TolC family8e-0652.4