Pre_GI: BLASTP Hits

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Query: NC_010067:3310336:3311018 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 3311018, End: 3311533, Length: 516

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:4361238:440083344008334401348516Salmonella enterica subsp. enterica serovar Schwarzengrund strLrgA family protein2e-78290
NC_006905:4405301:444499444449944445404411Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein3e-56217
NC_016612:1790256:179284317928431793253411Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLrgA family protein1e-44179
NC_020181:3585898:359852035985203598930411Enterobacter aerogenes EA1509E, complete genomeHolin-like protein CidA8e-41166
NC_008577:1015419:103111210311121031546435Shewanella sp. ANA-3 chromosome 1, complete sequenceLrgA family protein1e-1272
NC_007951:1971584:197377619737761974135360Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative murein hydrolase exporter LrgA(holin) like8e-1063.2
NC_015172:3095781:311443431144343114871438Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeLrgA family protein7e-0960.1
NC_007530:3414568:343235334323533432718366Bacillus anthracis str. 'Ames Ancestor', complete genomeholin-like protein6e-0960.1
NC_005945:3415135:343291934329193433284366Bacillus anthracis str. Sterne, complete genomeholin-like protein6e-0960.1
NC_003997:3414441:343222634322263432591366Bacillus anthracis str. Ames, complete genomeholin-like protein6e-0960.1
NC_012581:803456:806019806019806384366Bacillus anthracis str. CDC 684 chromosome, complete genomeholin-like protein6e-0960.1
NC_012659:3416000:343225334322533432618366Bacillus anthracis str. A0248, complete genomeholin-like protein6e-0960.1
NC_003909:3432073:345603334560333456398366Bacillus cereus ATCC 10987, complete genomeholin-like protein8e-0959.7
NC_006274:3490598:351168235116823512047366Bacillus cereus E33L, complete genomeholin-like protein8e-0959.7
NC_005957:3488021:350912735091273509492366Bacillus thuringiensis serovar konkukian str. 97-27, completeholin-like protein8e-0959.7
NC_012472:3503000:352419935241993524564366Bacillus cereus 03BB102, complete genomehypothetical protein8e-0959.7
NC_014335:3408081:342959534295953429960366Bacillus cereus biovar anthracis str. CI chromosome, completeLrgA family protein8e-0959.7
NC_017200:3501500:352270135227013523066366Bacillus thuringiensis serovar finitimus YBT-020 chromosome,holin-like protein8e-0959.7
NC_003366:2266757:226768722676872268064378Clostridium perfringens str. 13, complete genomehypothetical protein3e-0651.2
NC_008261:2481500:248153124815312481908378Clostridium perfringens ATCC 13124, complete genomelrgA family protein3e-0651.2
NC_008262:2150944:215094421509442151321378Clostridium perfringens SM101, complete genomelrgA family protein3e-0651.2
NC_015474:328500:335258335258335587330Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein4e-0650.8
NC_013508:1262333:126601112660111266430420Edwardsiella tarda EIB202, complete genomehypothetical protein5e-0650.4