Pre_GI: BLASTP Hits

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Query: NC_010067:3204682:3216653 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 3216653, End: 3217774, Length: 1122

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:346998:3531043531043551011998Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-125449
NC_004757:427483:4360754360754375681494Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein1e-108393
NC_010801:550270:5581815581815601391959Burkholderia multivorans ATCC 17616 chromosome 3, completehypothetical protein2e-108392
NC_010087:319063:3647193647193666501932Burkholderia multivorans ATCC 17616 chromosome 3, completeputative transcriptional regulator2e-108392
NC_015581:1731120:1742254174225417441511898Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome5e-90331
NC_015572:4618467:4641279464127946431831905Methylomonas methanica MC09 chromosome, complete genomeputative transcriptional regulator2e-81303
NC_006510:591339:5981275981275999981872Geobacillus kaustophilus HTA426, complete genomehypothetical protein3e-80299
NC_016593:596500:6033156033156051861872Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator6e-80298
NC_015660:3174424:3195670319567031975381869Geobacillus thermoglucosidasius C56-YS93 chromosome, completeputative transcriptional regulator2e-79296
NC_014638:1333976:1344016134401613455631548Bifidobacterium bifidum PRL2010 chromosome, complete genometranscriptional regulator4e-65248
NC_004307:2208591:2220838222083822224151578Bifidobacterium longum NCC2705, complete genomehypothetical protein with possible DNA binding domain associated with typeI restriction-modification system2e-63243
NC_015052:1771976:1780316178031617818631548Bifidobacterium longum subsp. infantis 157F, complete genometranscriptional regulator8e-62237
NC_010816:2326453:2340005234000523415521548Bifidobacterium longum DJO10A, complete genomePutative transcriptional regulator1e-61237
NC_017221:535000:5475075475075490841578Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein1e-61237
NC_015067:2136048:2141353214135321428971545Bifidobacterium longum subsp. longum JCM 1217, complete genometranscriptional regulator3e-54212
NC_012469:198096:1993471993472008611515Streptococcus pneumoniae Taiwan19F-14, complete genomedivergent AAA domain family1e-51203
NC_010380:254088:2553392553392568531515Streptococcus pneumoniae Hungary19A-6, complete genomedivergent AAA domain family1e-51203
NC_014251:440875:4415594415594430731515Streptococcus pneumoniae TCH8431/19A chromosome, complete genometranscriptional regulator1e-51203
NC_014616:1296287:1304526130452613056381113Bifidobacterium bifidum S17 chromosome, complete genomehypothetical protein6e-43175
NC_014844:1818939:1826351182635118281891839Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAAA-4 family protein3e-27123
NC_007404:2743877:2756352275635227582561905Thiobacillus denitrificans ATCC 25259, complete genomePredicted transcriptional regulator2e-25117
NC_007413:1405817:1415938141593814180012064Anabaena variabilis ATCC 29413, complete genomePredicted transcriptional regulator4e-22105
NC_012489:209016:2123302123302143271998Gemmatimonas aurantiaca T-27, complete genomehypothetical protein3e-2099.8
NC_004757:2730057:2759505275950527613911887Nitrosomonas europaea ATCC 19718, complete genomepossible ATP-dependent DNA helicase RecG-related protein2e-1790.1
NC_008782:3800500:3810915381091538128011887Acidovorax sp. JS42, complete genomeputative transcriptional regulator6e-1788.6
NC_014815:658893:6685076685076702941788Micromonospora sp. L5 chromosome, complete genometranscriptional regulator1e-1688.2
NC_009921:8717659:8724418872441887261661749Frankia sp. EAN1pec, complete genomeputative transcriptional regulator2e-1376.6
NC_014921:830334:8317958317958332161422Mycoplasma fermentans M64 chromosome, complete genometranscriptional regulator2e-1170.5
NC_013895:117429:1221781221781236201443Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completedivergent AAA domain protein5e-1168.9
NC_011832:619874:6332876332876346571371Candidatus Methanosphaerula palustris E1-9c, complete genomeputative transcriptional regulator2e-0963.9
NC_013721:820852:831739831739832707969Gardnerella vaginalis 409-05, complete genomehypothetical protein2e-0963.9
NC_013721:533048:545778545778546722945Gardnerella vaginalis 409-05, complete genomehypothetical protein4e-0962.8
NC_016051:241438:2647172647172660571341Thermococcus sp. AM4 chromosome, complete genomeATP-dependent DNA helicase8e-0961.6
NC_014614:356746:3567463567463580441299Clostridium sticklandii, complete genomehypothetical protein2e-0860.5
NC_008054:245184:263819263819264784966Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative transcriptional regulator (Crp family)4e-0859.7
NC_013530:3204825:3208470320847032102781809Xylanimonas cellulosilytica DSM 15894, complete genomeputative transcriptional regulator6e-0858.9
NC_015387:1091403:1097493109749310988991407Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeputative transcriptional regulator2e-0757
NC_014644:1275038:1282879128287912842941416Gardnerella vaginalis ATCC 14019 chromosome, complete genomeATP-dependent DNA helicase RecG3e-0756.6
NC_012470:1390285:1426713142671314281311419Streptococcus equi subsp. zooepidemicus, complete genomeDNA-binding protein5e-0755.8
NC_012471:719000:7377957377957392221428Streptococcus equi subsp. equi 4047, complete genomeDNA-binding protein6e-0755.5
NC_007575:973559:9873209873209886601341Sulfurimonas denitrificans DSM 1251, complete genomeputative transcriptional regulator2e-0653.9
NC_009767:2051203:2069909206990920710691161Roseiflexus castenholzii DSM 13941, complete genomeputative transcriptional regulator3e-0653.1
NC_014151:3611956:3618728361872836203651638Cellulomonas flavigena DSM 20109 chromosome, complete genomeputative transcriptional regulator5e-0652.4