Pre_GI: BLASTP Hits

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Query: NC_010067:3204682:3210611 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 3210611, End: 3210832, Length: 222

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:3982383:399572939957293995977249Dickeya dadantii Ech703, complete genome2e-24110
NC_008149:1195614:121048112104811210726246Yersinia pestis Nepal516, complete genomeDNA-binding protein2e-23107
NC_005126:1265071:126667212666721266932261Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-2199
NC_013716:5201097:521703852170385217226189Citrobacter rodentium ICC168, complete genomehypothetical protein2e-22104
NC_021066:3201500:321518432151843215456273Raoultella ornithinolytica B6, complete genomehypothetical protein7e-1785.9
NC_016860:2896254:291239029123902912674285Salmonella enterica subsp. enterica serovar Typhimurium strmaltose metabolism regulator5e-1993.2
NC_014228:3282500:328505932850593285277219Xenorhabdus nematophila ATCC 19061, complete genomePutatiave helix-turn-helix regulatory protein1e-1684.7
NC_016863:2844883:285730228573022857586285Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein5e-1993.2
NC_016856:2896630:290904929090492909333285Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein5e-1993.2
NC_003197:2870268:288882428888242889108285Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein5e-1993.2
NC_016857:2871689:291139029113902911674285Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein5e-1993.2
NC_009648:3224495:324306232430623243346285Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative cytoplasmic protein5e-1993.2
NC_003143:3115933:312031631203163120561246Yersinia pestis CO92, complete genomeputative DNA-binding protein2e-23107
NC_008150:2822689:282658828265882826833246Yersinia pestis Antiqua, complete genomeputative DNA-binding protein2e-23107
NC_005810:1230976:123355212335521233854303Yersinia pestis biovar Microtus str. 91001, complete genomeputative regulator2e-23107
NC_017168:2626996:264186326418632642108246Yersinia pestis A1122 chromosome, complete genomeputative regulator2e-23107
NC_014500:4691915:469834046983404698597258Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism2e-1891.3
NC_014500:3097362:314118531411853141490306Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism8e-1992.4
NC_014500:1066911:108564110856411085868228Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism4e-25113
NC_014500:443874:462414462414462680267Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism2e-1890.9
NC_014500:3519722:353207735320773532292216Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism3e-22103
NC_014500:3097362:313990431399043140215312Dickeya dadantii 3937 chromosome, complete genomeputative regulator for maltose metabolism2e-1994.4
NC_016818:3887000:391724339172433917500258Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator9e-22102
NC_020063:1051310:105732610573261057580255Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator2e-1994.4
NC_016818:859181:877253877253877534282Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator3e-2097.1
NC_020063:2785652:279681027968102797070261Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator9e-1682.4
NC_013421:701005:750806750806751027222Pectobacterium wasabiae WPP163, complete genomeputative transcriptional regulator, Nlp9e-25112
NC_012912:1701231:171672517167251717012288Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp9e-1992
NC_012912:4194821:419513241951324195398267Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp2e-1890.9
NC_013592:956829:975937975937976158222Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp9e-25112
NC_012880:3915500:393652639365263936789264Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp8e-22102
NC_012880:4117376:411737641173764117642267Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp2e-1890.9
NC_012917:3378759:338411533841153384330216Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, Nlp7e-24108
NC_013421:1819036:184323518432351843615381Pectobacterium wasabiae WPP163, complete genomeputative transcriptional regulator, Nlp1e-22104
NC_012880:3748665:377718637771863777431246Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp4e-22103
NC_012912:1701231:173017617301761730448273Dickeya zeae Ech1591, complete genomeputative transcriptional regulator, Nlp3e-21100
NC_013592:4511478:453214945321494532406258Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp1e-1891.7
NC_012880:3748665:375661837566183756890273Dickeya dadantii Ech703, complete genomeputative transcriptional regulator, Nlp1e-21102
NC_012917:4646491:465410646541064654363258Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, Nlp2e-1891.3
NC_013592:4295449:429793042979304298196267Dickeya dadantii Ech586, complete genomeputative transcriptional regulator, Nlp3e-1890.5
NC_004088:1265730:128054012805401280842303Yersinia pestis KIM, complete genomeregulator2e-23107
NC_011083:2847318:286333028633302863614285Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,regulator for maltose metabolism5e-1993.2
NC_016810:2871689:291139029113902911674285Salmonella enterica subsp. enterica serovar Typhimurium strregulator for maltose metabolism5e-1993.2
NC_017046:2896651:291013129101312910415285Salmonella enterica subsp. enterica serovar Typhimurium str. 798regulator for maltose metabolism5e-1993.2
NC_014228:3391500:340251634025163402776261Xenorhabdus nematophila ATCC 19061, complete genomesugar fermentation stimulation protein (Ner-like protein) (fragment)4e-2096.7
NC_013282:551219:574205574205574480276Cronobacter turicensis, complete genomeSugar fermentation stimulation protein B2e-22104
NC_020260:3355814:337700333770033377293291Cronobacter sakazakii Sp291, complete genomesugar fermentation stimulation protein B2e-21100
NC_012214:474359:492274492274492603330Erwinia pyrifoliae Ep1/96, complete genomesugar fermentation stimulation protein B1e-1891.7
NC_013961:441719:475545475545475874330Erwinia amylovora, complete genomeSugar fermentation stimulation protein B5e-1889.7
NC_014228:3391500:342080434208043421088285Xenorhabdus nematophila ATCC 19061, complete genomesugar fermentation stimulation protein B (Ner-like protein)3e-21100
NC_014228:3391500:339434533943453394614270Xenorhabdus nematophila ATCC 19061, complete genomeSugar fermentation stimulation protein B (Ner-like protein)6e-2199.4
NC_014228:3282500:331666433166643316930267Xenorhabdus nematophila ATCC 19061, complete genomeSugar fermentation stimulation protein B (Ner-like protein)2e-2097.4
NC_013892:3278647:329793132979313298215285Xenorhabdus bovienii SS-2004 chromosome, complete genometranscriptional activator of maltose metabolism2e-21100
NC_013892:1483000:149894614989461499230285Xenorhabdus bovienii SS-2004 chromosome, complete genometranscriptional activator of maltose metabolism3e-21100
NC_014500:894136:906023906023906268246Dickeya dadantii 3937 chromosome, complete genometranscriptional regulator1e-23108
NC_004547:1062410:107489010748901075132243Erwinia carotovora subsp. atroseptica SCRI1043, complete genometranscriptional regulator9e-24108
NC_016845:4498097:451548245154824515733252Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transcriptional regulator Nlp8e-24108
NC_014618:4114004:411814141181414118395255Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator Nlp8e-24108
NC_016845:4498097:451313245131324513392261Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transcriptional regulator Nlp2e-23107
NC_014618:1103239:112429011242901124538249Enterobacter cloacae SCF1 chromosome, complete genometranscriptional regulator Nlp1e-1892
NC_003198:4513900:453731245373124537533222Salmonella enterica subsp. enterica serovar Typhi str. CT18,transcriptional regulatory protein6e-27119